| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1306 |
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| Symbol | |
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| ID | 6485212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1292937 |
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| End bp | 1293575 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642736704 |
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| Product | hypothetical protein |
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| Protein accession | YP_002040461 |
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| Protein GI | 194446688 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.123286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.000000111415 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAAAAA TGCATCGCTA CGCCGCCATC GCTGCGCTGG CGATATTTCT CTCCGGGTGT
ATGGCGCAAC GTCAACCTGC GCCAGTTGAA GAGGTAAAAC CAGCGCCAGA ACAACCCGCG
CAGCCACCAC AGCCTCCTGT CGTGCCGTCT GTGCCAACGA TTCCACAGCA ACCGGGGCCG
ATCGAACATG AAGATCAAAC GGGCCAGCCA GCGCCTAAGG TGCGCCACTA TGACTGGAAC
GGCGCGATGC AACCGCTGGT CAGCAAAATG TTGCAGGCTG ATGGCGTGAC GGCCGGAAAC
GTATTGCTTG TCGACAGCGT GAATAACCGG ACGAATGGGT CATTAAATGC GAACGAGGCA
ACGGAAACGT TACGTAATGC GCTGGCGAAC AACGGTAAAT TTACGCTGGT CTCCGTACAG
CAACTCTCGA TGGCAAAACA GCAGTTAGGG TTGTCTCCGC AGGATAGTCT GGGAACGCGC
AGTAAAGCTA TTGGCATTGC ACGCAATGTC GGGGCGCAAT ATGTACTTTA CTCCAGCGCA
TCCGGTAACG TTAACGCGCC TGCATTACAG ATGCAGTTAA TGCTGGTGCA AACTGGCGAG
ATAATCTGGT CAGGTAAAGG TGCGGTCCAA CAACAATAA
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| Protein sequence | MTKMHRYAAI AALAIFLSGC MAQRQPAPVE EVKPAPEQPA QPPQPPVVPS VPTIPQQPGP
IEHEDQTGQP APKVRHYDWN GAMQPLVSKM LQADGVTAGN VLLVDSVNNR TNGSLNANEA
TETLRNALAN NGKFTLVSVQ QLSMAKQQLG LSPQDSLGTR SKAIGIARNV GAQYVLYSSA
SGNVNAPALQ MQLMLVQTGE IIWSGKGAVQ QQ
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