Gene SNSL254_A1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1272 
SymbolflgC 
ID6485943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1260453 
End bp1260857 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content56% 
IMG OID642736672 
Productflagellar basal body rod protein FlgC 
Protein accessionYP_002040429 
Protein GI194446237 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0147313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTGT TAAACATTTT TGATATTGCC GGATCGGCGC TTGCCGCGCA GTCCAAGCGG 
TTGAACGTTG CGGCCAGTAA CCTGGCGAAT GCGGATAGCG TCACCGGCCC GGACGGACAG
CCTTATCGCG CCAAACAGGT GGTTTTTCAG GTGGACGCCG CGCCGGGTCA AGCCACTGGC
GGGGTAAAGG TCGCCAGCGT GATTGAAAGT CAGGCACCGG AAAAGCTGGT TTATGAGCCA
GGCAACCCGC TGGCGGACGC TAATGGTTAC GTCAAAATGC CCAACGTCGA TGTGGTCGGC
GAAATGGTCA ACACGATGTC AGCCTCGCGC AGCTATCAGG CAAATATCGA AGTCCTGAAT
ACCGTAAAAA GCATGATGCT TAAAACGCTG ACATTAGGCC AGTAA
 
Protein sequence
MALLNIFDIA GSALAAQSKR LNVAASNLAN ADSVTGPDGQ PYRAKQVVFQ VDAAPGQATG 
GVKVASVIES QAPEKLVYEP GNPLADANGY VKMPNVDVVG EMVNTMSASR SYQANIEVLN
TVKSMMLKTL TLGQ