Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1260 |
Symbol | pyrC |
ID | 6484674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1250301 |
End bp | 1251347 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642736660 |
Product | dihydroorotase |
Protein accession | YP_002040417 |
Protein GI | 194445421 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0418] Dihydroorotase |
TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.374418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCAC CATCCCAGGT TTTAAAGATC CGCCGCCCGG ACGACTGGCA CGTTCACCTT CGCGATGGCG ACATGTTAAA AACGGTCGTA CCCTATACCA GCGAAATTTA TGGTCGCGCT ATCGTGATGC CGAACCTGGC GTCCCCCATC ACGACCGTTG ATGCAGCGAT CGCCTACCGC CAGCGTATTC TCGATGCGGT GCCCGCCGGG CATGATTTCA CGCCGTTGAT GACCTGCTAT TTAACGGATT CGCTCGATGC CGATGAACTG GAGCGTGGTT TCCATGAAGG CGTGTTTACT GCGGCTAAGC TTTACCCGGC CAATGCCACC ACTAACTCCA GTCATGGCGT AACGTCAGTC GACGCTATCA TGCCGGTACT GGAGCGGATG GAAAAACTCG GAATGCCATT ACTGGTCCAC GGTGAGGTGA CCCATGCGGA TGTTGATATC TTCGATCGCG AAGCGCGTTT TATCGACACC GTAATGGAAC CGCTACGCCA GCGTCTGACC ACGCTTAAAG TGGTCTTTGA GCACATCACG ACCAAAGATG CCGCGCAGTA TGTACGTGAC GGCAACGACT ACCTGGCGGC TACCATTACG CCTCAACATT TAATGTTTAA CCGTAATGAT ATGCTGGTCG GCGGCATTCG TCCTCACCTG TACTGTCTGC CGATTCTAAA ACGCAATATT CACCAGCAGG CGTTACGCGA ACTGGTTGCC AGTGGTTTTA CGCGCGCCTT CCTGGGGACG GATTCAGCGC CGCATTCACG TCATCGTAAA GAGACCAGTT GCGGCTGCGC CGGTTGTTTC AACGCCCCCT CCGCCCTTGG CAGTTATGCC GCCGTGTTTG AGGAAATGAA CGCGCTGGCG CACTTTGAAG CGTTCTGTTC ACTGAATGGC CCGCAATTCT ATGGCCTGCC GGTGAATACG GGGTGGGTGG AACTGGTTCG CGATGAACAA CATGTACCGG AAAATATCGC GCTGGCTGAT GATTCGCTGG TGCCTTTTTT AGCGGGTGAA ACAGTACGCT GGTCAGTAAA AAAATAA
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Protein sequence | MTAPSQVLKI RRPDDWHVHL RDGDMLKTVV PYTSEIYGRA IVMPNLASPI TTVDAAIAYR QRILDAVPAG HDFTPLMTCY LTDSLDADEL ERGFHEGVFT AAKLYPANAT TNSSHGVTSV DAIMPVLERM EKLGMPLLVH GEVTHADVDI FDREARFIDT VMEPLRQRLT TLKVVFEHIT TKDAAQYVRD GNDYLAATIT PQHLMFNRND MLVGGIRPHL YCLPILKRNI HQQALRELVA SGFTRAFLGT DSAPHSRHRK ETSCGCAGCF NAPSALGSYA AVFEEMNALA HFEAFCSLNG PQFYGLPVNT GWVELVRDEQ HVPENIALAD DSLVPFLAGE TVRWSVKK
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