Gene SNSL254_A1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1248 
Symbol 
ID6485979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1242373 
End bp1242576 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content53% 
IMG OID642736648 
Producthypothetical protein 
Protein accessionYP_002040405 
Protein GI194443179 
COG category[R] General function prediction only 
COG ID[COG5645] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.370829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATTA CCCTGAGCGG CTGCGGCAGT ATTATCAGCA GAACGATCCC CGGACAAGGA 
CACGGCAACC AGTATTACCC TGGCGTGCAG TGGGATATGC GTGATTCCGC ATGGCGCTAT
ATCACTATCC TCGATCTGCC CTTCTCACTG ATCTTCGATA CACTGCTACT GCCGCTCGAT
ATTCACCACG GGCCTTATGA GTAA
 
Protein sequence
MVITLSGCGS IISRTIPGQG HGNQYYPGVQ WDMRDSAWRY ITILDLPFSL IFDTLLLPLD 
IHHGPYE