Gene SNSL254_A1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1232 
Symbol 
ID6482606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1227875 
End bp1228612 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content52% 
IMG OID642736632 
Productputative hydrolase 
Protein accessionYP_002040389 
Protein GI194444451 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCCG TTGACCTGCA TATGCATACC GTCGCCAGCA CTCATGCCTA CAGTACTCTG 
AGCGATTATA TCGCGGAAGC CAAACGCAAA GGTATTAAAC TTTTTGCGAT TACCGATCAT
GGTCCGGACA TGGAAGATGC GCCGCATCAC TGGCATTTTA TTAACATGCG CATCTGGCCG
CGTCTGGTTG ACGGCGTGGG GATACTGCGT GGCATTGAGG CGAATATCAA GAACATTAAC
GGTGAAATTG ATTGTTCCGG AAAGATGTTC GACTCGCTGG ATCTGATTAT CGCAGGCTTC
CATGAGCCCG TTTTTGCGCC ACATGATAAA GAAACCAATA CCCAGGCGAT GATCGCGACC
ATCGCCAGCG GCAAGGTGCA TATAATTAGT CACCCCGGAA ATCCAAAGTA TCCAGTGGAG
GTTAAAGCCA TCGCGCAGGC GGCGGCGAAA CACCATGTAG CGCTGGAAAT CAACAACTCT
TCTTTTCTGC ATTCGCGTAA AGGAAGCGAA GATAATTGCC GCGCGGTCGC TGCCGCCGTA
CGCGATGCGG GAGGCTGGGT AGCGTTAGGC TCTGATTCCC ATACGGCCTT TACGCTTGGC
GATTTCACCG AATGCCGGAA AATTCTGGAT GCGGTGAATT TTCCGGAAGA TCGAATCCTG
AACGTCTCGC CGCAGCGCTT ACTGGCCTTT CTCGAATCAC GCGGTATGGC GCCTGTACCG
GAATTTGCCG AACTTTAA
 
Protein sequence
MYPVDLHMHT VASTHAYSTL SDYIAEAKRK GIKLFAITDH GPDMEDAPHH WHFINMRIWP 
RLVDGVGILR GIEANIKNIN GEIDCSGKMF DSLDLIIAGF HEPVFAPHDK ETNTQAMIAT
IASGKVHIIS HPGNPKYPVE VKAIAQAAAK HHVALEINNS SFLHSRKGSE DNCRAVAAAV
RDAGGWVALG SDSHTAFTLG DFTECRKILD AVNFPEDRIL NVSPQRLLAF LESRGMAPVP
EFAEL