Gene SNSL254_A1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1120 
Symbol 
ID6485488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1130843 
End bp1131160 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content55% 
IMG OID642736522 
Productheat shock protein HspQ 
Protein accessionYP_002040281 
Protein GI194443348 
COG category[S] Function unknown 
COG ID[COG3785] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02097] hemimethylated DNA binding domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0000000000000870055 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAGCCA GCAAATTCGG TATCGGCCAA CAGGTCCGCC ATTCCCTGTT AGGTTACCTC 
GGAGTGGTCG TCGATATCGA CCCGGAATAT TCGCTTGATG AACCGTCGCC TGATGAACTG
GCGGTTAACG ACGAACTTCG CGCCGCTCCG TGGTACCACG TGGTAATGGA AGATGATGAT
GGTCAGCCAG TGCATACTTA TCTGGCCGAG GCCCAGTTGC GAAGCGAAAT GCGGGACGAG
CATCCAGAAC AGCCATCGAT GGATGAACTG GCGCGTACCA TTCGCAAGCA GCTTCAGGCG
CCGCGACTAC GTAACTGA
 
Protein sequence
MIASKFGIGQ QVRHSLLGYL GVVVDIDPEY SLDEPSPDEL AVNDELRAAP WYHVVMEDDD 
GQPVHTYLAE AQLRSEMRDE HPEQPSMDEL ARTIRKQLQA PRLRN