| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1086 |
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| Symbol | |
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| ID | 6484652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1093263 |
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| End bp | 1096613 |
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| Gene Length | 3351 bp |
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| Protein Length | 1116 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642736490 |
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| Product | host specificity protein J |
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| Protein accession | YP_002040249 |
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| Protein GI | 194446675 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4733] Phage-related protein, tail component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG GTGGAGGGAA GGGGCATACA CCACGTGAGG CGAAGGACGA TCTGAAGTCC
ACACAACAAC TGAGCGTGAT TGATGCCCTC AGTGAGGGAC CGATAGTCGG CCCGGTGAAC
GGTCTGCAGA GCGTGCTGAT TAATAACACG CCGGTGGTGG ACGCGGACGG TAACAGTAAT
ATTCACGGCG TGACCGTGGT ATATCAGGTG GGGGAGACAC CACAGGCACC GCTGGAAGGT
TTTGAGGCTT CCGGCGCGGA AACGGTGCTG GGTGTGGAAG TGAAACACGA TAATCCCGTT
ACCCGTACTG TTGTCTCAGA GAATGTCGAC CGGCTACGCT TCACCTTTGG TGTACAGATG
CTGCAGGAGA CCACGGACAA GGGGGACCGT AACCCGTCCT CCGTGAATCT GCTGATACAG
TTTCAGCGTA GCGGGATCTG GAACACAGAA TTTGATATCA CTATTAACGG CAAGATCACA
ACACAATATC TGGCATCGGT AGTGGCTGAT AATTTACCGC CGCGCCCGTT CAGTGTCCGC
ATGGTCAGGG TGACACCGGA CAGCACCACC GACAGGCTTC AGAACAAAAC GCTGTGGTCG
TCGTATACGG AAATCATCGA TATCCGGCAG GGTTATCCTG GCACAGCGGT TGCCGGTCTG
CTGGTGGATG CGGAACAGTT CGGCAGCCAG CAGGTCACGC GTAACTACCA CCTGCGCGGA
CGTATTTTTC AGGTCCCCTC AAACTATGAC CCGGATACCC GCACATATAC CGGCCTGTGG
GACGGGGCGT TTAAACCGGC GTACACGAAT AACCCGGCGT GGTGCACGAT GGATAAACTG
ACCCACCCCC GTTACGGGCT GGGCAGGCGT ATCGGGGGGG CGGATGTGGA TAAATGGGCG
CTGTACGCCA TCGCGCAGTA CTGCGATCAA CCGGTGCCGG ACGGATTTGG CGGCACGGAA
CCCCGCATGA CGCTTAATGC GTATATTACC ACCCAGCGTA AGGCGTATGA CGTTCTGGCG
GATTTCTGCT CGGTGATGCG TTGTATGCCG GTATGGAATG GCCGCAAAAT GACCTTCATC
CAGGACCGCC CCTCCGATAA AGCATGGACC TACACCAACG GTAACGTGGT GGGCGGGCGC
TTTAAATACA GCTTCAGTGC CCTGAAAGAC CGCCATAACG CGGTAGAAGT GAGATACACC
GATCCGCTGA ATGGCTGGCA AACCTCCACG GAGCTGGTGG AAGACCATGC CTCACAGGCC
CGTTATGGAC GCAATCTGCT GAAAATGGAC GCGTTCGGCT GTACCTCACG TGGACAGGCG
CACCGGACGG GGTTGTGGGT GATGATGACG GAGCTGCTGG AAACGCAGAC CGTGGATTTT
TCTGTCGGTG CGGAAGGTCT GCGTCATACA CCGGGCGATA TTATTGAGGT CTGCGACAAC
GATTACGCCG GGGCGTCGGT CGGTGGGCGT ATCACTGACC TGGATATTTC CACCCGCACG
CTGACGCTTG ACCGGGAAAT AACACTACCG GAAAGCGGCG CCACCACGCT GAATATTGTC
GGGCCTGACG GTAAGCCGTT CAGTACGGAG ATTCAGTCGC AGCCCGCACC GGATCGGGTG
GTAACGAAAG TCCTGCCGGA AACCGTGCAG CCATACAGTA TCTGGGGGCT GAAACTGCCC
TCCCTGAAGC GCCGCCTTTT CCGTTGCGTG CGTATTAAGG AGAATGACGA CGGCACATAC
GCTATCACTG CCTTGCAGCA CGTTCCGGAA AAAGAGTCCA TCGTGGACAA CGGGGCGCAC
TTTGACCCGT TACCGGGGAC CACCAACAGC ATTATTCCGC CCGCTGTGCA GCATCTGACA
GTCAGCACGG ATAACGACAG TACCCTGTAT CAGGCCAAAG CGAAGTGGGG CACGCCGCGG
GTGGTAAAAG ATGTGCGTTT TGTGGTGAGG CTGACCACAG GCAGTGGGAA CGAGGGCGAT
CCGGTTCGTC TGGTGACAAC GGCGACGACC AGCGAAACGG AGTACGCCTT CCACGAACTG
CCACTGGGTG ACTACACGCT GACAGTCAGG GCAATAAACG GTTACGGGCA GCAGGGTGAA
CCGGCGTCCG TGGCATTCAG TATTCAGGCA CCGGAAGCGC CATCCACGAT TGAGATGACG
CCGGGTTATT TTCAGATAAC GGTGACGCCG CACCAGACTG TCTACGATGC CAGTGTGCAG
TATGAGTTCT GGTACTCCGC CACGCAACTG GCGACTGCCG CCGATATTCA GTCAAAAGCA
CAGTATCTGG GCGTCGGGTC ATTCTGGATA AAGGATGGAC TGAAACCACT GCATGATGCC
TGGTTTTACG TGCGCAGTGT AAATCTGGCT GGAAAATCAG TATTTGCGGA AGCATCCGGA
CGTCCGGGGG ATGACGCGAA AGGGTATCTG GATTTTTTTA AGGGACTGAT TACGGAGACG
TATCTTGGTA CGGAGTTGCT GAAAAAAATT GACCTGACGG AGAATAACGC CAGCAAACTG
CAACAATTTT CGAAGGAGTG GCAGGACGCT AACGATAAAT GGAGCGCCAC GTGGGGCGTC
AAAATAGAGC AGACCAAAGA CGGCAAATAT TATGTGGCCG GACTTGGACT GAGCATGGAA
GACACGCCTG ACGGGAAGAT AAGCCAGTTC CTGGTGGCGG CGGATCGCAT TGCTTATATT
AACCCGGCAA ACGGAAACGA GACGCCCGGA TTCGTCATGC AGGGCGACCA GATAATCATG
AATGAGGCGT TCCTGAAATA CCTGAGCGCG CCGACCATTA CCAGTGGCGG GAATCCTCCG
GCATTTTCCC TGACGCCGGA TGGAAAGCTG ACTGCGAAAA ATGCGGATAT CAGCGGCCAT
ATCAACGCTG TATCTGGCTC GTTTACGGGA GAAATCAATG CCACCTCCGG TAAGTTTTCT
GGCGTGATAG AAGCAAGAGA GTTTGTCGGT GATATCTGCG GCTCAAAAGT CATGCAGGGC
GTGAGCATCA GGGCGACGAA CGACGAACGC AGCACCTCAA CACGGTATAC CGACAGCGCC
ACCTATCAGA TAGGGAAAAC CATCACGGTG ATGGCTAACT GTGAGCGTAA CGGTGGCACC
GGTGCCATCA CCGTCACGAT AAATATTAAC GGCCAGGTGA AAACGGCGGA GGTTATGCCG
TATACCGCAG GGATTCCGGC CATGTATCAG ACCGTCGTCT TTTCGGTCTA CACCACTTCA
CCTGTCGTGG ATATCAGCGT CTCTCTGAGG GTCCGTGGGC AGTACACCAC GTCTGCTTCC
GTCTGGCCGC TGGTGATGGT TTCCCGGTCG GGGAGCAACT TCACAAACTG A
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| Protein sequence | MSKGGGKGHT PREAKDDLKS TQQLSVIDAL SEGPIVGPVN GLQSVLINNT PVVDADGNSN
IHGVTVVYQV GETPQAPLEG FEASGAETVL GVEVKHDNPV TRTVVSENVD RLRFTFGVQM
LQETTDKGDR NPSSVNLLIQ FQRSGIWNTE FDITINGKIT TQYLASVVAD NLPPRPFSVR
MVRVTPDSTT DRLQNKTLWS SYTEIIDIRQ GYPGTAVAGL LVDAEQFGSQ QVTRNYHLRG
RIFQVPSNYD PDTRTYTGLW DGAFKPAYTN NPAWCTMDKL THPRYGLGRR IGGADVDKWA
LYAIAQYCDQ PVPDGFGGTE PRMTLNAYIT TQRKAYDVLA DFCSVMRCMP VWNGRKMTFI
QDRPSDKAWT YTNGNVVGGR FKYSFSALKD RHNAVEVRYT DPLNGWQTST ELVEDHASQA
RYGRNLLKMD AFGCTSRGQA HRTGLWVMMT ELLETQTVDF SVGAEGLRHT PGDIIEVCDN
DYAGASVGGR ITDLDISTRT LTLDREITLP ESGATTLNIV GPDGKPFSTE IQSQPAPDRV
VTKVLPETVQ PYSIWGLKLP SLKRRLFRCV RIKENDDGTY AITALQHVPE KESIVDNGAH
FDPLPGTTNS IIPPAVQHLT VSTDNDSTLY QAKAKWGTPR VVKDVRFVVR LTTGSGNEGD
PVRLVTTATT SETEYAFHEL PLGDYTLTVR AINGYGQQGE PASVAFSIQA PEAPSTIEMT
PGYFQITVTP HQTVYDASVQ YEFWYSATQL ATAADIQSKA QYLGVGSFWI KDGLKPLHDA
WFYVRSVNLA GKSVFAEASG RPGDDAKGYL DFFKGLITET YLGTELLKKI DLTENNASKL
QQFSKEWQDA NDKWSATWGV KIEQTKDGKY YVAGLGLSME DTPDGKISQF LVAADRIAYI
NPANGNETPG FVMQGDQIIM NEAFLKYLSA PTITSGGNPP AFSLTPDGKL TAKNADISGH
INAVSGSFTG EINATSGKFS GVIEAREFVG DICGSKVMQG VSIRATNDER STSTRYTDSA
TYQIGKTITV MANCERNGGT GAITVTININ GQVKTAEVMP YTAGIPAMYQ TVVFSVYTTS
PVVDISVSLR VRGQYTTSAS VWPLVMVSRS GSNFTN
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