Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0980 |
Symbol | clpA |
ID | 6484819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 984307 |
End bp | 986583 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642736386 |
Product | ATP-dependent Clp protease ATP-binding subunit |
Protein accession | YP_002040146 |
Protein GI | 194445498 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAATC AAGAACTGGA ACTCAGTTTA AACATGGCTT TCGCCAGAGC GCGCGAGCAC CGTCATGAGT TTATGACCGT CGAGCATCTG TTGCTGGCGC TGCTCAGCAA CCCATCGGCT CGCGAAGCGC TGGAAGCATG CTCCGTGGAT CTGGTGGCGC TCCGTCAGGA ACTCGAAGCC TTCATTGAAC AAACCACACC CGTACTGCCT GCCAGTGAAG AAGAGCGTGA TACGCAGCCG ACGTTAAGTT TCCAGCGTGT CCTGCAACGT GCCGTCTTCC ATGTTCAGTC TTCCGGGCGT AGTGAAGTGA CTGGCGCGAA TGTGCTGGTG GCTATCTTTA GCGAACAGGA ATCACAGGCG GCTTATCTGC TGCGCAAGCA TGAAGTGAGC CGTCTGGATA TCGTGAACTT TATTTCTCAC GGGACGCGAA AAGACGAACC GAGCCAATCT TCCGATCTCG GCAATCAGCC AACTGGCGAC GAACAAGCTG GCGGGGAGGA ACGTATGGAA AACTTCACGA CGAATCTTAA CCAACTTGCT CGCGTGGGCG GCATCGATCC GCTGATTGGT CGTGAAAAAG AACTTGAACG CGCGATCCAG GTCTTGTGTC GTCGCCGTAA AAATAACCCG TTGCTGGTAG GGGAATCCGG CGTCGGCAAA ACGGCGATTG CCGAAGGGCT GGCCTGGCGT ATCGTGCAGG GCGATGTGCC GGAAGTGATG GCCGATTGCA CCATTTACTC GCTGGATATC GGTTCGCTGC TGGCGGGCAC CAAATACCGC GGCGATTTTG AAAAACGGTT TAAGGCGTTG CTGAAACAGC TTGAGCAGGA TACCAACAGC ATCCTGTTTA TCGATGAAAT CCATACCATT ATCGGCGCTG GCGCGGCGTC GGGCGGACAG GTGGATGCGG CAAATCTGAT TAAACCGCTG CTTTCCAGCG GCAAGATCCG GGTGATCGGC TCAACGACCT ATCAGGAATT CAGCAATATT TTTGAGAAAG ACCGCGCATT AGCGCGCCGT TTCCAGAAAA TTGATATTAC CGAGCCTTCG GTGGAAGAGA CGGTGCAAAT TATCAACGGC TTGAAACCTA AGTACGAAGC GCACCACGAC GTGCGTTATA CCGCGAAAGC GGTGCGTGCG GCGGTCGAGC TGGCGGTAAA ATATATCAAT GACCGCCATC TGCCGGATAA AGCCATTGAC GTGATTGACG AAGCGGGCGC TCGGGCGCGT CTGATGCCGG TGAGCAAACG TAAGAAAACG GTCAACGTGG CGGATATTGA GTCCGTAGTG GCGCGAATTG CGCGAATTCC TGAAAAGAGC GTCTCGCAGA GCGATCGCGA TACGCTGAAG AACCTGGGCG ATCGTCTGAA AATGCTGGTC TTCGGCCAGG ATAACGCGAT TGAGGCGCTG ACCGAAGCTA TTAAGATGAG TCGTGCGGGT CTGGGCCATG AGCATAAACC TGTCGGCTCA TTCTTGTTCG CCGGGCCAAC TGGCGTAGGG AAAACTGAAG TTACGGTACA GCTTTCAAAA GCGCTGGGTA TTGAGCTGTT GCGCTTCGAT ATGTCCGAAT ATATGGAACG TCATACGGTG AGCCGTTTGA TCGGCGCGCC TCCGGGATAC GTCGGTTTCG ACCAGGGCGG GCTGCTGACG GATGCGGTGA TTAAGCATCC TCATGCGGTG CTGCTGCTGG ATGAGATCGA AAAAGCGCAC CCGGATGTCT TTAACCTGCT GCTGCAGGTG ATGGATAACG GTACGCTGAC CGATAACAAC GGCCGTAAGG CGGATTTCCG CAACGTGGTG CTGGTGATGA CCACCAACGC CGGCGTGCGA GAAACCGAAC GTAAATCTAT TGGTCTTATT CATCAGGACA ACAGTACCGA TGCGATGGGC GAGATCAAGA AAGTGTTTAC GCCGGAGTTC CGTAACCGTC TCGACAACAT TATTTGGTTC GATCATCTGT CTGGCGAGGT GATTCATCAG GTTGTCGATA AGTTTATCGT CGAGTTGCAG GCTCAGTTGG ATCAGAAAGG CGTCTCCCTG GAGGTCAGTC AGGAAGCGCG CGACTGGCTG GCGGAAAAGG GCTATGACCG GGCGATGGGC GCACGACCAA TGGCGCGTGT GATTCAGGAT AACCTGAAAA AACCGCTGGC CAATGAGTTG CTGTTTGGAT CGCTGGTTGA CGGCGGACAG GTCACCGTCG CGCTGGATAA AGAGAAAAAT GCGTTGACGT ATGGCTTCCA GAGTGCGCAA AAGCACAAGC CGGAAGCCGC GCATTAA
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Protein sequence | MLNQELELSL NMAFARAREH RHEFMTVEHL LLALLSNPSA REALEACSVD LVALRQELEA FIEQTTPVLP ASEEERDTQP TLSFQRVLQR AVFHVQSSGR SEVTGANVLV AIFSEQESQA AYLLRKHEVS RLDIVNFISH GTRKDEPSQS SDLGNQPTGD EQAGGEERME NFTTNLNQLA RVGGIDPLIG REKELERAIQ VLCRRRKNNP LLVGESGVGK TAIAEGLAWR IVQGDVPEVM ADCTIYSLDI GSLLAGTKYR GDFEKRFKAL LKQLEQDTNS ILFIDEIHTI IGAGAASGGQ VDAANLIKPL LSSGKIRVIG STTYQEFSNI FEKDRALARR FQKIDITEPS VEETVQIING LKPKYEAHHD VRYTAKAVRA AVELAVKYIN DRHLPDKAID VIDEAGARAR LMPVSKRKKT VNVADIESVV ARIARIPEKS VSQSDRDTLK NLGDRLKMLV FGQDNAIEAL TEAIKMSRAG LGHEHKPVGS FLFAGPTGVG KTEVTVQLSK ALGIELLRFD MSEYMERHTV SRLIGAPPGY VGFDQGGLLT DAVIKHPHAV LLLDEIEKAH PDVFNLLLQV MDNGTLTDNN GRKADFRNVV LVMTTNAGVR ETERKSIGLI HQDNSTDAMG EIKKVFTPEF RNRLDNIIWF DHLSGEVIHQ VVDKFIVELQ AQLDQKGVSL EVSQEARDWL AEKGYDRAMG ARPMARVIQD NLKKPLANEL LFGSLVDGGQ VTVALDKEKN ALTYGFQSAQ KHKPEAAH
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