Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0948 |
Symbol | rimK |
ID | 6482821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 950895 |
End bp | 951797 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642736355 |
Product | ribosomal protein S6 modification protein |
Protein accession | YP_002040115 |
Protein GI | 194443283 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 107 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAATTG CCATATTGTC CAGGGATGGA ACGCTCTATT CTTGCAAACG TCTGCGCGAA GCGGCGATGC GGCGCGGCCA TCTGGTCGAG ATACTCGATC CTCTTTCCTG CTATATGAAT ATTAATCCGG CTGCGTCGTC GATCCATTAC AAGGGGCGTC GTCTGCCCCA TTTTGACGCC GTTATTCCCC GTATTGGTTC GGCCATTACC TTTTATGGTA CCGCTGCGCT ACGTCAGTTT GAGCTACTGG GTAGCTATCC GCTGAATGAA TCCGTCGCTA TTACCCGCGC GCGCGATAAG CTGCGATCGC TACAACTTCT GGCGCGCCAG GGGATCGATC TCCCCATTAC CGGGATCGCC CATTCGCCGG ATGATACCAG CGATCTTATT AAGATGGTTG GCGGGGCGCC GCTGGTCGTG AAGCTGGTAG AAGGCACGCA AGGGATCGGC GTGGTATTGG CGGAGACGCG TCAGGCTGCT GAAAGCGTTA TTGATGCGTT TCGGGGGCTG AATGCCCATA TCCTGGTTCA GGAATACATT GCCGAAGCTA AAGGATGCGA TATTCGTTGT CTGGTCGTCG GCAATGAGGT TGTGGCGGCG ATTGAGCGGT GCGCGAAAGC CGGTGATTTT CGCTCCAATC TTCATCGTGG CGGGGTGGCC AGCATCGCGA CGATCACGCC TCGTGAACGG GATATCGCCA TCAAAGCCGC ACAAACGCTG GGGCTGGATG TGGCGGGCGT CGATATTTTA CGCGCCGCGC GCGGGCCGCT GGTGATGGAG GTGAATGCCT CGCCGGGACT GGAAGGTATC GAAAAGACTA CGGGCGTAGA TATCGCGGGG CGAATGATTC AGTGGATAGA ACGTCACGCT ACACCTGAAT TTTGCCTTAA AATCGGCGGC TAA
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Protein sequence | MKIAILSRDG TLYSCKRLRE AAMRRGHLVE ILDPLSCYMN INPAASSIHY KGRRLPHFDA VIPRIGSAIT FYGTAALRQF ELLGSYPLNE SVAITRARDK LRSLQLLARQ GIDLPITGIA HSPDDTSDLI KMVGGAPLVV KLVEGTQGIG VVLAETRQAA ESVIDAFRGL NAHILVQEYI AEAKGCDIRC LVVGNEVVAA IERCAKAGDF RSNLHRGGVA SIATITPRER DIAIKAAQTL GLDVAGVDIL RAARGPLVME VNASPGLEGI EKTTGVDIAG RMIQWIERHA TPEFCLKIGG
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