Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0920 |
Symbol | rimO |
ID | 6483321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 927850 |
End bp | 929175 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642736331 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_002040091 |
Protein GI | 194445570 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAATG TAACCCACCA GCCAAAGATC GGCTTCGTTT CCCTGGGCTG TCCGAAAAAC CTCGTTGATT CGGAACGCAT CCTGACTGAG CTGCGTACCG AAGGCTATGA CGTTGTGCCA CGCTATGACG ATGCGGATAT GGTTATCGTT AATACCTGTG GCTTTATTGA CAGCGCGGTA CAAGAGTCGC TGGAAGCCAT TGGCGAAGCG CTGAACGAAA ACGGTAAGGT AATCGTCACC GGCTGCCTGG GCGCAAAAGA AGATCAGATC CGCGAAGTGC ATCCGAAAGT ACTGGAAATC ACCGGGCCGC ATAGCTATGA GCAAGTTCTG CAGCACGTAC ATCATTACGT ACCGAAGCCG AAGCACAATC CATTTTTAAG CCTCGTACCG GAACAGGGTG TAAAACTGAC GCCGCGCCAT TATGCGTATC TGAAAATTTC TGAAGGCTGT AATCACCGCT GCACGTTCTG CATCATCCCG TCGATGCGCG GGGATCTGGT CAGCCGTCCG ATTGGCGACG TATTAAGCGA AGCGAAACGT CTGGTTGATG CCGGGGTCAA AGAGATTCTG GTGATTTCGC AAGATACCTC CGCCTACGGC GTAGATGTGA AGCACCGCAC CGGATTCCAT AATGGCGAAC CGGTGAAAAC CAGTATGGTG AGCCTGTGCG AACAGTTATC AAAACTGGGC GTCTGGACAC GTCTGCACTA CGTCTACCCC TACCCACACG TTGATGATGT GATTCCGCTA ATGGCGGAAG GCAAAATCCT GCCTTATCTG GACATTCCGC TGCAACATGC CAGCCCGCGG ATTCTTAAAC TGATGAAACG TCCTGGTTCC GTTGACCGCC AGCTGGCGCG CATTAAGCAG TGGCGCGAAA TCTGCCCGGA ACTGACCCTA CGCTCCACCT TTATTGTCGG CTTCCCCGGC GAAACGGAAG AAGACTTCCA GATGCTGCTC GACTTCCTGA AAGAGGCGCG CCTCGATCGT GTAGGCTGCT TCAAGTACAG CCCGGTGGAA GGCGCAGGCG CGAATGAGCT GCCGGATCAG GTGCCGGAAG AGGTGAAAGA AGAGCGCTGG AACCGCTTTA TGCAACTGCA ACAGCAAATC TCCGCTGAGC GCTTGCAGGA AAAAGTGGGC CGCGAAATTC TGGTGATCGT CGATGAGGTT GACGAAGAAG GCGCTATCGG GCGTAGCATG GCGGATGCGC CGGAAATTGA CGGCGCGGTC TATTTGAACG GCGAAACCAA CGTCAAGCCG GGCGATATCG TGCGCGTGAA AGTGGAAAAC GCCGACGAAT ATGATTTGTG GGGCAGTCGG GTTTAA
|
Protein sequence | MSNVTHQPKI GFVSLGCPKN LVDSERILTE LRTEGYDVVP RYDDADMVIV NTCGFIDSAV QESLEAIGEA LNENGKVIVT GCLGAKEDQI REVHPKVLEI TGPHSYEQVL QHVHHYVPKP KHNPFLSLVP EQGVKLTPRH YAYLKISEGC NHRCTFCIIP SMRGDLVSRP IGDVLSEAKR LVDAGVKEIL VISQDTSAYG VDVKHRTGFH NGEPVKTSMV SLCEQLSKLG VWTRLHYVYP YPHVDDVIPL MAEGKILPYL DIPLQHASPR ILKLMKRPGS VDRQLARIKQ WREICPELTL RSTFIVGFPG ETEEDFQMLL DFLKEARLDR VGCFKYSPVE GAGANELPDQ VPEEVKEERW NRFMQLQQQI SAERLQEKVG REILVIVDEV DEEGAIGRSM ADAPEIDGAV YLNGETNVKP GDIVRVKVEN ADEYDLWGSR V
|
| |