Gene SNSL254_A0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0876 
Symbol 
ID6484008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp882671 
End bp883429 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content57% 
IMG OID642736288 
Productendonuclease/exonuclease/phosphatase family protein 
Protein accessionYP_002040048 
Protein GI194443379 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC ACACGCGAAA TTTTTCATTC AAAGTGCTCA CAATTAATAC GCACAAAGGT 
TTTACCGCCT TTAATAAACG CTTCATCCTG CCGGAGCTGC GCGACGCTGT CAGAACGGTC
GGCGCCGATA TCGTCTGTCT GCAAGAAGTG ATGGGCGCGC ATGAAGTACA TCCGCTGCAT
ATCGAAAACT GGCCGGACAC TACCCACTAT GAATTTTTGG CCGACACCAT GTGGAGCGAT
TTCGCCTATG GCCGCAATGC GGTCTATCCG GAAGGCCACC ACGGTAACGC GGTTCTTTCT
CGCTATCCCA TTGAACATTA TGAAAATCGC GACGTCTCGG TCGGCGGTAG CGAAAAACGC
GGCGTGCTCT ATTGCCGCAT TACGCCGCCC ATGCTCAACC GCCCTATCCA CGTCATGTGC
GTACATCTCG GCCTGCGGGA GAGCCACCGC CAGGCGCAGT TAACCATGCT GGCGGGATGG
GTGAATGCCT TGCCGGAATC AGAACCGGTG CTGGTGGCCG GAGACTTTAA TGACTGGCGG
CAAAAGGCCG GCCCGCCATT AAACGCGGCC GGGCTGGAGG AGATATTCAC CCGTGCCCAT
GGCCGACCGG CGCGCACATT CCCGGTGAGT ATGCCGCTGC TGCGACTCGA TCGTATTTAC
GTCAAGAATG CGAACGCCAG TTCTCCTACG GCGCTACCGC TGCGGAACTG GCGACATTTA
TCAGACCATG CCCCCCTTAG CGCGGAGATC CATCTATGA
 
Protein sequence
MTQHTRNFSF KVLTINTHKG FTAFNKRFIL PELRDAVRTV GADIVCLQEV MGAHEVHPLH 
IENWPDTTHY EFLADTMWSD FAYGRNAVYP EGHHGNAVLS RYPIEHYENR DVSVGGSEKR
GVLYCRITPP MLNRPIHVMC VHLGLRESHR QAQLTMLAGW VNALPESEPV LVAGDFNDWR
QKAGPPLNAA GLEEIFTRAH GRPARTFPVS MPLLRLDRIY VKNANASSPT ALPLRNWRHL
SDHAPLSAEI HL