Gene SNSL254_A0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0874 
Symbol 
ID6483416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp880471 
End bp881433 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content54% 
IMG OID642736286 
Productinner membrane protein YbhN 
Protein accessionYP_002040046 
Protein GI194442238 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAT CGCATCCGCG CTGGCGGCTG GCTAAAAAAG TGCTGACCTG GCTGTTTTTT 
ATTGCGGTCG TCGTTCTGCT GGTGGTTTAT GCTAAAAAGG TCGACTGGGG CGATGTCTGG
ACCGTCATCC GTGACTATAA CCGCACGGCG CTTTTAAGCG CTGTAGGACT GGTGATCGTT
AGCTATCTTC TGTACGGCTG CTACGACCTG CTTGGACGGC TTTATTGCGG CCATAAACTG
GCGAAGCGAC AGGTGATGTT GGTATCGTTC GTCTGCTATG CCTTTAACCT GACGCTCAGC
ACCTGGGTCG GCGGGATCGG GATGCGTTAC CGACTGTACT CTCGCCTCGG GTTGCCCGGC
AGTACTATCA CGCGTATTTT CTCACTCAGC ATTACCACTA ACTGGCTGGG CTATATTCTG
CTTGGTGGCA TCATTTTTAC CTTCGGCATT GTCCAGCTTC CCGACCACTG GTATATCGAT
GAAGGCACGC TACGTATTCT CGGTATCGTT TTATTGTTGA TTATCGCGGT CTATCTGTGG
TTTTGCGCCT TTGCGAAGCG GCGGCATATG ACGATTAAAG GGCAGAAACT GGTGCTGCCG
TCATGGAAAT TCGCACTGGC GCAGATGGCA ATCTCCAGCG CGAACTGGAT GGCGATGGGC
GCCATCATCT GGCTGCTGAT GGGTCAGGAT GTGAACTATT TCTTTGTACT GGGCGTACTG
CTGGTGAGCA GTATCGCGGG CGTCATCGTG CATATTCCGG CAGGCATCGG CGTGCTGGAG
GCCGTATTCC TTGCGTTGCT GGCGGGCGAA CATACGTCGC AAGGCACGAT TATCGCCGCC
CTGCTCGCAT ACCGCGTGCT TTACTATTTT ATTCCCCTGT TGCTGGCGCT GGTGTGCTAT
CTGATCCTGG AGAGCCGGGC GAAGAAGCTG CGGGCGAAAA ACGAGCGGGC GATGGCGAAA
TAA
 
Protein sequence
MAKSHPRWRL AKKVLTWLFF IAVVVLLVVY AKKVDWGDVW TVIRDYNRTA LLSAVGLVIV 
SYLLYGCYDL LGRLYCGHKL AKRQVMLVSF VCYAFNLTLS TWVGGIGMRY RLYSRLGLPG
STITRIFSLS ITTNWLGYIL LGGIIFTFGI VQLPDHWYID EGTLRILGIV LLLIIAVYLW
FCAFAKRRHM TIKGQKLVLP SWKFALAQMA ISSANWMAMG AIIWLLMGQD VNYFFVLGVL
LVSSIAGVIV HIPAGIGVLE AVFLALLAGE HTSQGTIIAA LLAYRVLYYF IPLLLALVCY
LILESRAKKL RAKNERAMAK