Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0849 |
Symbol | |
ID | 6486682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 853532 |
End bp | 854527 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642736261 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_002040021 |
Protein GI | 194446085 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAA CAGTCTATAC CGCCAGCCCT GAGAGTCAGC AAATTCACGT CTGGAGCCTG AACCACGAAG GGACGCTGAC GCTGGTGCAG GTCGTGGATG TGCCCGGTCA GGTTCAGCCG ATGGTGGTCA GTCCGGATAA ACGCTACCTC TATGTCGGCG TGCGCCCGGA GTTTCGTGTC CTGGCGTATC GTATTGCGCC GGATGATGGC GCGCTGACGT TTGCCGCCGA ATCCGCCCTG CCGGGTAGCC CGACCCATAT TTCTACCGAT CATCATGGTC GTTTTGTCTT TGTCGGATCG TATAACGCCG GTAATGTCAG CGTGACGCGC TTACAGGATG GCCTGCCGGT TGAGTTGGTG GATGTGGTGG AGGGGCTGGA CGGCTGCCAC TCGGCAAATA TTACGCCTGA TAACCGTACC CTGTGGGTGC CTGCGCTAAA ACAGGATCGC ATTTGTCTGT TTACGCTAAG CGATGACGGC CATCTGGTGG CCCAGGAGCC GGCGGAAGTA AATACGGTTG AAGGGGCAGG CCCGCGTCAT ATGGTCTTCC ACCCGAATCG ACAATATGCG TATTGCGTCA ATGAACTGAA CAGTTCGGTG GATGTCTGGC AGCTTAAAAA TCCGCATGGC GAGATAGAGT GCGTGCAAAC GCTGGATATG ATGCCCGCCG ATTTTTCCGA TACCCGCTGG GCGGCGGATA TTCATATTAC GCCGGATGGA CGGCATCTGT ATGCCTGTGA CCGCACCGCC AGTCTGATTA CCGTCTTTAG TGTCTCCGAA GATGGCAGCG TACTGAGCGT TGAAGGCTTC CAGCCGACGG AAGCCCAACC GCGCGGCTTT AATATCGACA ATAGCGGAAA ATACCTGATT GCAGCGGGTC AAAAATCACA TCATATCGCG GTCTATGAAA TTACGGGCAC TCAGGGGTTG CTGACGGAAA AAGGCCGTTA TGCCGTCGGC CAGGGGCCAA TGTGGGTTGT AGTGAACGCG TACTAA
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Protein sequence | MKQTVYTASP ESQQIHVWSL NHEGTLTLVQ VVDVPGQVQP MVVSPDKRYL YVGVRPEFRV LAYRIAPDDG ALTFAAESAL PGSPTHISTD HHGRFVFVGS YNAGNVSVTR LQDGLPVELV DVVEGLDGCH SANITPDNRT LWVPALKQDR ICLFTLSDDG HLVAQEPAEV NTVEGAGPRH MVFHPNRQYA YCVNELNSSV DVWQLKNPHG EIECVQTLDM MPADFSDTRW AADIHITPDG RHLYACDRTA SLITVFSVSE DGSVLSVEGF QPTEAQPRGF NIDNSGKYLI AAGQKSHHIA VYEITGTQGL LTEKGRYAVG QGPMWVVVNA Y
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