Gene SNSL254_A0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0831 
SymboloadA 
ID6485099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp834482 
End bp836257 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content64% 
IMG OID642736243 
Productoxaloacetate decarboxylase 
Protein accessionYP_002040003 
Protein GI194443228 
COG category[C] Energy production and conversion 
COG ID[COG5016] Pyruvate/oxaloacetate carboxyltransferase 
TIGRFAM ID[TIGR01108] oxaloacetate decarboxylase alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.977578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTT CCATTACCGA CGTCGTCCTG CGTGACGCCC ACCAGTCCCT TTTCGCCACC 
CGTCTGCGCC TTGACGATAT GCTGCCGATT GCCGCCGCGC TCGACGACGT GGGCTACGGC
TCCCTCGAAT GCTGGGGCGG CGCCACCTTT GACGCCTGCA TCCGCTTTCT CGGCGAGGAC
CCGTGGCTGC GCCTGCGCGA GCTCAAAAAA GCCATGCCGA AGACTCCCCT GCAGATGCTG
CTGCGCGGCC AGAACCTGCT CGGCTATCGC CATTACGCCG ATGACGTGGT GGAACGCTTC
GTCGAACGCG CGGTGAAAAA CGGCATGGAC GTCTTCCGCG TCTTCGACGC CATGAACGAC
CCGCGCAATA TGAAAGCCGC ATTACAGGCG GTACGCAGCC ACGGCGCGCA CGCCCAGGGC
ACGCTGAGCT ATACCACCAG TCCGGCGCAC ACCCTGCAGA CCTGGCTGGA TTTAACGGAG
CAACTGCTGG AAACCGGCGT TGACTCGATT GCCATCAAGG ATATGTCCGG CATTCTCACC
CCGATGGCCG CTTTTGAGCT GGTGAGCGAA ATCAAAAAAC GTTTTGAGGT GCGCCTGCAC
CTGCACTGTC ACGCCACCAC CGGGATGGCG GAGATGGCCC TGCTGAAGGC TATCGAGGCG
GGCGTTGACG GCGTCGACAC GGCGATTTCC TCCATGAGCG CCACCTACGG CCACCCGGCC
ACCGAAGCGC TGGTGGCGAC GTTGGCAGGT ACTGAGCACG ACACCGGGCT GGATATCCTG
AAGCTGGAAA ATATCGCCGC GTACTTCCGC GAGGTGCGCA AAAAGTATCA CGCCTTTGAA
GGCCAGCTGA AGGGCTACGA CAGCCGTATT CTGGTGGCCC AGGTGCCGGG CGGAATGCTC
ACTAACCTCG AAAGCCAGCT GAAGCAGCAG AACGCGGCGG ACAAACTCGA CCAGGTGCTG
GCGGAAATCC CCCGCGTGCG CGAGGACCTC GGCTTTATCC CGCTGGTGAC CCCGACCTCG
CAGATTGTCG GCACTCAGGC GGTGCTCAAC GTCCTGACCG GAGAACGCTA CAAAACCATC
GCCAAAGAAA CCGCCGGCAT TCTGAAAGGC GAATACGGCC ACACCCCGGT GCCGGTCAAC
GCGGCGTTAC AGGCCCGCGT GCTGGAAGGG GGCGCTCCGG TGACCTGCCG TCCGGCGGAC
CTGCTGAGAC CGGAGCTGGC TGAACTGGAA GCGGACGTCA GGCGCCAGGC GCAGGAGAAG
GGCATCACTC TGGCGGGAAA CGCCATCGAC GACGTGCTCA CCGTGGCGCT GTTCCCGCAA
ATCGGCCTCA AATTCCTTGA AAACCGCCAC AACCCGGCGG CGTTTGAGCC GGTACCGCAG
GCGGAAGCCG CGCAGCCTGC CGCTGCCCCG GCAAAAGCTG CAGCTTCCGG TATCTACACC
GTCGAAGTGG AAGGCAAGGC CTTTGTGGTG AAGGTCAGCG ACGGCGGCGA TATCAGCCAG
CTTACTACGG CTGTTCCGGC GGCCTCTTCC GCACCGGTTC AGGCTGCCGC TCCGGCAGGC
GCAGGCACCC CGGTCACCGC GCCGCTGGCG GGCAACATCT GGAAGGTGAT TGCCGCTGAA
GGCCAGACGG TGGCCGAAGG CGATGTGCTG CTGATTCTGG AAGCCATGAA AATGGAAACC
GAAATCCGCG CCGCGCAGGC CGGGACGGTA CGCGGTATCG CCGTGAAGTC CGGGGACGCC
GTCTCCGTGG GCGATACCCT GATGACGCTG GCGTAA
 
Protein sequence
MTISITDVVL RDAHQSLFAT RLRLDDMLPI AAALDDVGYG SLECWGGATF DACIRFLGED 
PWLRLRELKK AMPKTPLQML LRGQNLLGYR HYADDVVERF VERAVKNGMD VFRVFDAMND
PRNMKAALQA VRSHGAHAQG TLSYTTSPAH TLQTWLDLTE QLLETGVDSI AIKDMSGILT
PMAAFELVSE IKKRFEVRLH LHCHATTGMA EMALLKAIEA GVDGVDTAIS SMSATYGHPA
TEALVATLAG TEHDTGLDIL KLENIAAYFR EVRKKYHAFE GQLKGYDSRI LVAQVPGGML
TNLESQLKQQ NAADKLDQVL AEIPRVREDL GFIPLVTPTS QIVGTQAVLN VLTGERYKTI
AKETAGILKG EYGHTPVPVN AALQARVLEG GAPVTCRPAD LLRPELAELE ADVRRQAQEK
GITLAGNAID DVLTVALFPQ IGLKFLENRH NPAAFEPVPQ AEAAQPAAAP AKAAASGIYT
VEVEGKAFVV KVSDGGDISQ LTTAVPAASS APVQAAAPAG AGTPVTAPLA GNIWKVIAAE
GQTVAEGDVL LILEAMKMET EIRAAQAGTV RGIAVKSGDA VSVGDTLMTL A