Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0792 |
Symbol | sdhD |
ID | 6484042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 802986 |
End bp | 803333 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642736204 |
Product | succinate dehydrogenase cytochrome b556 small membrane subunit |
Protein accession | YP_002039970 |
Protein GI | 194443367 |
COG category | [C] Energy production and conversion |
COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.43609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.0735606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTAAGCA ACGCCTCCGC ATTAGGACGC AATGGCGTAC ATGACTTCAT CCTGGTCCGT GCTACCGCTA TCGTTCTGAC GTTATACATC ATCTACATGG TGGGTTTTTT CGCCACGAGC GGCGAACTGA CCTTTGAAGC CTGGACCGGT TTCTTCTCAT CGGCCTTCAC CAAAGTCTTC ACCCTGCTGG CGCTTTTTTC CATCTTGATT CATGCCTGGA TCGGCATGTG GCAGGTGTTA ACCGACTACG TTAAACCACT GGCAGTGCGT CTGATACTGC AACTCGTTAT TGTTGTTGCG CTGGTGGTTT ACGTCATCTA TGGATTTGTT GTGGTGTGGG GTGTGTAA
|
Protein sequence | MVSNASALGR NGVHDFILVR ATAIVLTLYI IYMVGFFATS GELTFEAWTG FFSSAFTKVF TLLALFSILI HAWIGMWQVL TDYVKPLAVR LILQLVIVVA LVVYVIYGFV VVWGV
|
| |