| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0788 |
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| Symbol | |
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| ID | 6482696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 798536 |
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| End bp | 799327 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642736200 |
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| Product | endonuclease VIII |
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| Protein accession | YP_002039966 |
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| Protein GI | 194446665 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0698035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAG GCCCGGAAAT TCGTCGTGCG GCGGATAATC TGGAGGCGGC AATCAAAGGC
AAACCCTTAA CCGATGTCTG GTTTGCCTTT GCACAGTTAA AACCGTATGA ATCGCAGCTT
ACCGGTCAAC TTGTTACCCG GATAGAGACG CGGGGAAAAG CGTTATTGAC CCACTTTTCA
AATGGCCTGA CGCTCTACAG CCACAACCAA CTCTATGGCG TATGGCGGGT GATCGATACT
GGTGAAATAC CGCAGACCAC GCGTATATTG CGCGTCAGGC TACAAACGGC GGATAAAACT
ATTCTGCTTT ATAGCGCGTC TGATATCGAA ATGCTGACAG CAGAGCAGCT CACGACGCAC
CCTTTTTTAC AGCGAGTCGG TCCGGATGTG TTGGACGCGC GTCTTACTCC GGAAGAGGTT
AAAGCTCGAT TGCTGTCGCC GCGTTTTCGC AACCGACAAT TTTCCGGACT GTTGCTGGAT
CAGGCCTTTC TGGCGGGATT GGGGAATTAT CTGCGCGTTG AAATCCTCTG GCAGGTAGGG
TTAACCGGAC AGCATAAAGC GAAAGATCTC AACGAGGCGC AACTGAATGC GCTTTCTCAC
GCGCTGTTGG ATATTCCGCG CCTTTCCTAC ACTACTCGCG GTCAGGCGGA TGAGAACAAG
CATCATGGCG CACTGTTTCG CTTTAAGGTT TTCCACCGTG ACGGCGAAGT GTGCGAGCGG
TGCGGCGGCA TTATTGAAAA GACAACACTG TCCTCACGCC CGTTTTACTG GTGCCCGCAT
TGCCAGAAAT AG
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| Protein sequence | MPEGPEIRRA ADNLEAAIKG KPLTDVWFAF AQLKPYESQL TGQLVTRIET RGKALLTHFS
NGLTLYSHNQ LYGVWRVIDT GEIPQTTRIL RVRLQTADKT ILLYSASDIE MLTAEQLTTH
PFLQRVGPDV LDARLTPEEV KARLLSPRFR NRQFSGLLLD QAFLAGLGNY LRVEILWQVG
LTGQHKAKDL NEAQLNALSH ALLDIPRLSY TTRGQADENK HHGALFRFKV FHRDGEVCER
CGGIIEKTTL SSRPFYWCPH CQK
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