Gene SNSL254_A0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0781 
Symbol 
ID6485215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp790685 
End bp791818 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content36% 
IMG OID642736193 
Productgalactosyltransferase 
Protein accessionYP_002039959 
Protein GI194446387 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.176556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0501278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGT TATGTTATTT TGTAAATTCA GACTGGTACT TTGATTTACA TTGGACAGAA 
CGTGCGATAG CGGCAAGGGA TGCGGGTTAT GAAATTCATA TCATAAGTCA TTTTATTGGT
GAAGAGATTA TAAAAAAATT CAAAACGCTT GGTTTTATTT GTCACAATGT GTCTCTTGTT
GCTCAGTCAT TTAATATGTT TGTTTTTTTT AGAGCATTCC TTAACGCTCG GAAAATTATT
AAAGAGATTA ATCCTGACTT ATTGCATTGT ATTACGCTCA AACCTTGCCT GATTGGTGGG
GTTAGCGCCA GGAGAAGTAA TAGTCCAGTT GTTATCAGCT TTGTCGGACT TGGTCGAATC
TTTTTATATA ATACCGTGCC AATGAGAATA TTGCGTGCGT TAACCGTTTT GGTTTACAAA
TATATTGCCG GTAATAAGCG TGGTGTTTTT ATTTTTGAAC ATGATAAAGA TCGACGAAAA
ATATCGCGTT TAGTAGGTAT TGATTATCAT AAAACTATCG TTATCGAAGG TGCTGGAATT
AACCCGGATA TTTATAAATT CTCTATAGAG AAAAAACATG AGATACCGAT AGTCCTTTTT
GCAAGCCGAA TGTTATGGAG TAAAGGTCTT GGCGATCTCA TTGAAGCAAA AAAGATCCTC
AGACAAAAAA ATATTCATTT TGTTTTAAAT GTTGCAGGTA TATTGGCCGA GGACGATAAA
GATGCTATCC CTTTGGAGCT CATTCATCAC TGGCATAATG AAGGACTAAT TAACTGGCTG
GGACGCTCTT CGAATGTATA TGAGCTTATT CAGAAATCGA ATATCGTTGC ATTACCATCT
ATTTATCCGG AAGGAGTACC ACGGCTTTTA TTAGAGGCAT CATCTGTAGG ACGTGCATGT
ATTGCTTATG ATACCGGCGG ATGTGATAGC TTAATTATTC ATAACTATAA TGGGTTGATC
GTGAAAAGTA ATTCAGCTCA GGAGTTAGCG GTAGAATTAG AGTATTTGTT AAAAAATCCA
CAGATTCGCT TAGAGATGGG GGCGAATGGA AGAAAACGTG TAAAGGAATT GTTTTCCAGC
ATATTAGTCA TTAATAAGAC ATTGCAAATT TATAAAGACA CTATTGGTTG CTAA
 
Protein sequence
MKRLCYFVNS DWYFDLHWTE RAIAARDAGY EIHIISHFIG EEIIKKFKTL GFICHNVSLV 
AQSFNMFVFF RAFLNARKII KEINPDLLHC ITLKPCLIGG VSARRSNSPV VISFVGLGRI
FLYNTVPMRI LRALTVLVYK YIAGNKRGVF IFEHDKDRRK ISRLVGIDYH KTIVIEGAGI
NPDIYKFSIE KKHEIPIVLF ASRMLWSKGL GDLIEAKKIL RQKNIHFVLN VAGILAEDDK
DAIPLELIHH WHNEGLINWL GRSSNVYELI QKSNIVALPS IYPEGVPRLL LEASSVGRAC
IAYDTGGCDS LIIHNYNGLI VKSNSAQELA VELEYLLKNP QIRLEMGANG RKRVKELFSS
ILVINKTLQI YKDTIGC