| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0780 |
|---|
| Symbol | |
|---|
| ID | 6483522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 789779 |
|---|
| End bp | 790672 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642736192 |
|---|
| Product | putative glycosyl transferase |
|---|
| Protein accession | YP_002039958 |
|---|
| Protein GI | 194445175 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0260013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.0469615 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGTA CAGCGCTAAT CGTAACTTTT AACCGTCTTG AAAAATTAAA AAAAAGTGTG
CGAGAGACTG TTAAGGCGGG TTTTTCCTCT ATTGTTATCG TTAATAATGG CTCAAGCGAC
GGTACCAGGG AATGGCTTTC TTCATTAAGT GAACCTGGCA TCACGATACT TAATCTTAAA
GATAATCTTG GTGGTGCTGG CGGATTTAAA GTAGGTAGTC AATATATATG CTCATATAGT
AATGCCGATT GGGTATTTTT CTATGATGAT GATGCTTACC CGGAAATTAA TATTTTAAAG
CATTTCTCGT TATTAGATAC CTCAAGATAC CGTATATTTG CGTCGCGAGT TCAGGACACC
TATGGACGGT CTTGTCGGAT GAATTTGCCT TTCATCAGGG TTCCATCTAC GGTGTTTGAG
ACTATTTATT ATGTGATACG CCCAGAGAGG TTTTCTCCAG TAAGAACTCA GGTTACTGAT
GTTCAAACTG TGTCATTCGT TGGTATGATT ATTGATCGAA AGGTATTGAA TAACCATCTT
AACGATATCC ATGATGAACT TTTCCTTTAT TATGATGATT TTTTCTTTGG TTATAAGCTA
GTATTGTCCG GGCAGAAAAT TCGTTACTCC CCAGAAATTA AATTTATTCA TGATATCTCT
ATTCATGGAA AGTGTATCTG CCCCGAATGG AAAGTATATT ATCTTTGTAG AAATTTGTTG
CTGCTGAGAA AACTTTTACC CGTTCCCAGG ATATTCAGTG TTCTTTCTAT AGTGTTACGC
CTCTCTAAAT ATCTCGCCAT ATTACCATGG CAGCGTAAGA AATTTCGTTA TCTATATTTT
ATCTGGCAGG GAATACTTCA TGGACTTAAA GGTATTAGTG GGAAATATCA TTAG
|
|---|
| Protein sequence | MKCTALIVTF NRLEKLKKSV RETVKAGFSS IVIVNNGSSD GTREWLSSLS EPGITILNLK
DNLGGAGGFK VGSQYICSYS NADWVFFYDD DAYPEINILK HFSLLDTSRY RIFASRVQDT
YGRSCRMNLP FIRVPSTVFE TIYYVIRPER FSPVRTQVTD VQTVSFVGMI IDRKVLNNHL
NDIHDELFLY YDDFFFGYKL VLSGQKIRYS PEIKFIHDIS IHGKCICPEW KVYYLCRNLL
LLRKLLPVPR IFSVLSIVLR LSKYLAILPW QRKKFRYLYF IWQGILHGLK GISGKYH
|
|---|
| |