Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0751 |
Symbol | |
ID | 6484809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 759965 |
End bp | 760891 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642736163 |
Product | LysR family transcriptional regulator |
Protein accession | YP_002039929 |
Protein GI | 194446525 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000639538 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.380791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTTC GCCAGTTACG CTATTTCGTG CGTATTATTG AAACCGGCAG TATGGGCAGC GCCGCACAGG ATCTTGATAT TGGCGTTTCA GCATTAAGTC AACAGATGTC CCGTCTGGAA AACGAGCTTG CTATCCGTCT GCTGCAGCGC ACCTCGCGCG GCGTAACGCC AACCAACGCC GGGCTGGCCT TTTATTCACA GGCGCAACTC GCCCTGCGTC ATGCCGACGA CGCGATTCTC GCCGCCAGAG AAGCGCGCCT TTCCGGTCAT GTGAGCGTAG GAATGGCCCC CAGTACCGCC TCCATACTGG GTATACCGTT TATCCATGCC ATGCAGGAAA ACTATGCCGA TGTCCGACTG CATGTGGTGG AAAGCTTGTC CGGTAATCTG GAAAGAATGA TCAATACCCG CCAGATTGAT TTAGCCGTTG TCTTTCAAAA AGATAAAATC CTGCGCTGGA GCGCCAGACC GATCCTTGAA GAACAGCTTT TTCTGATTGG CTCCCATGCC CTGCTGGCGG CGCTTCCTGA TAACCCGATC ACACCTGAAC AACTGGCAGG CATTCCGCTC ATTATGCCAA GCCAGGGACA CGGGCTGCGC GGCAGGCTGG ACGCTGTCTG CCAGGAACAT GCGCTTAACG TTGAAATCGT CGCGGAAATT GACGGCCTGG CGTTGTTGAT GCGCGCCGTG CGCGACGGTC TTGGCGCCAC GTTGCAGCCC GGCGCGGCGA TTTCTCATCT GGATAACGAC GCGCTACGCG TGATCGGCGT CCATAATCCG GTACTCAGCC GCCCCAATTT TTTAGTCAGC CTGTCGGATG ATGAACTGAC GCCCGCCGGC CTTGCCGCCA GAGTAGTCCT TACCAAAGTT ATGCGTCAGT TAGTCGACGC CGGTGAATGG CCAGGCGCAA CCCTTTACGC TTACTAA
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Protein sequence | MELRQLRYFV RIIETGSMGS AAQDLDIGVS ALSQQMSRLE NELAIRLLQR TSRGVTPTNA GLAFYSQAQL ALRHADDAIL AAREARLSGH VSVGMAPSTA SILGIPFIHA MQENYADVRL HVVESLSGNL ERMINTRQID LAVVFQKDKI LRWSARPILE EQLFLIGSHA LLAALPDNPI TPEQLAGIPL IMPSQGHGLR GRLDAVCQEH ALNVEIVAEI DGLALLMRAV RDGLGATLQP GAAISHLDND ALRVIGVHNP VLSRPNFLVS LSDDELTPAG LAARVVLTKV MRQLVDAGEW PGATLYAY
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