| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0730 |
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| Symbol | ubiF |
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| ID | 6486837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 740452 |
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| End bp | 741627 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642736142 |
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| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
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| Protein accession | YP_002039915 |
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| Protein GI | 194446092 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.11675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATC AACCAACGGA AATTGCCATT GTCGGCGGGG GAATGGTCGG CGGCGCGCTG
GCGCTGGGTC TGGCGCAGCA AGGGTTTACG GTGATGGTAA TAGAACATGC CGCGCCTGCG
CCGTTTGTGG CTGACAGCCA GCCTGACGTG CGGATTTCGG CCATTAGCGC GGCATCCGTG
GCGCTGCTCA AGGGGCTGGG CGTTTGGGAG GCGGTGCAGG GGATGCGTAG CCATCCTTAT
CGGCGACTGG AGACCTGGGA GTGGGAAAAC GCCCATGTGG TGTTCGACGC CGCTGAACTC
AAGCTGCCGC TGTTAGGCTA TATGGTAGAG AACAACGTCC TGCAACAGGC GCAGTGGCAG
GCGCTGGAAG CGCACCCCGG CGTGACGCTG CGCGTTCCGG CCTCACTGGC GGCATTGCAC
CGCCGCCACG ATGGTTATGC GCTGGAACTG GCCGACGGCG AATGGGTAAC GCCGAAGTTA
GTGATTGGCG CCGACGGCGC GAATTCGCAG GTTCGGCAAC TGGCGGGAAT TGGCATTCAT
GCCTGGCAAT ATGCACAGTC GTGTATGCTT ATCACCGTCA AGTGTGAAAA TGCGCCAGGC
GACAGCACCT GGCAGCAGTT TACGCCAACG GGGCCGCGCG CCTTTTTGCC GCTGTTCGAC
GATTGGGCGT CGCTGGTGTG GTATGACGCT CCGGCACGTA TTCGCCAGCT ACAGAATTTA
TCGATGACGC AATTGCAGGT GGAAATTAAC CAGCACTTTC CGGCGCGTCT GGGGGCGGTG
ATGCCTGTCG CGGCGGGCGC GTTTCCGCTA ACCCGTCGTC ACGCGTTGCA GTATGTACAA
CCGGGGCTGG CGCTGGTAGG CGACGCGGCG CATACCATTC ATCCGCTGGC CGGGCAGGGC
GTCAACCTGG GGTATCGGGA TGTTGATGCG TTGATTGATG TGCTGGCGAG TGCCCGTAGC
TATGGTGAGT CCTGGGCCAG CCATTCGGTG TTGAAACGCT ATCAGACGCG GCGCATGGCA
GATAATTTTA TGATGCAAAG TGGAATGGAT CTGTTTTATG CCGGGTTCAG CAATGAACTG
CCGCCGCTGC GTATTTTACG CAATATGGGG CTGATGGCGG CGCAGCGCGC AGGCGTGCTA
AAACGTCAGG CGCTGAAGTA TGCGTTGGGG TTGTAA
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| Protein sequence | MTNQPTEIAI VGGGMVGGAL ALGLAQQGFT VMVIEHAAPA PFVADSQPDV RISAISAASV
ALLKGLGVWE AVQGMRSHPY RRLETWEWEN AHVVFDAAEL KLPLLGYMVE NNVLQQAQWQ
ALEAHPGVTL RVPASLAALH RRHDGYALEL ADGEWVTPKL VIGADGANSQ VRQLAGIGIH
AWQYAQSCML ITVKCENAPG DSTWQQFTPT GPRAFLPLFD DWASLVWYDA PARIRQLQNL
SMTQLQVEIN QHFPARLGAV MPVAAGAFPL TRRHALQYVQ PGLALVGDAA HTIHPLAGQG
VNLGYRDVDA LIDVLASARS YGESWASHSV LKRYQTRRMA DNFMMQSGMD LFYAGFSNEL
PPLRILRNMG LMAAQRAGVL KRQALKYALG L
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