Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0701 |
Symbol | |
ID | 6483959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 710174 |
End bp | 711268 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642736114 |
Product | threonine-phosphate decarboxylase |
Protein accession | YP_002039887 |
Protein GI | 194445568 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0153114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTAT TCAACAGCGC GCATGGCGGT AATATTCGGG AAGCCGCGAC GGTGTTGGGC ATCTCGCCTG ACCAGTTACT GGATTTTAGC GCAAACATTA ATCCGCTGGG TATGCCTGTC AGCGTGAAAC GCGCGCTTAT CGACAATCTG GACTGCATTG AGCGCTACCC GGACGCCGAT TATTTTCATT TGCACCAGGC GCTGGCGCGT CACCATCAGG TGCCGGCATC GTGGATACTG GCGGGAAATG GCGAGACGGA GTCAATCTTT ACCGTGGCGA GCGGTCTTAA ACCGCGTCGT GCAATGATTG TCACGCCAGG TTTCGCGGAG TATGGCCGGG CGCTGGCGCA AAGTGGCTGT GAAATTCGTC GCTGGTCTCT ACGCGAAGCG GATGACTGGC AGCTTACCGA TGCCATTCTC GAGGCGTTGA CGCCCGATCT GGACTGCCTG TTTCTGTGTA CGCCCAATAA TCCTACCGGC CTGCTGCCGG AGCGGCCGTT ATTACAGGCC ATTGCCGATC GCTGCAAATC GCTGAGCATT AACCTGATCC TGGATGAGGC GTTTATCGAT TTTATTCCGC ATGAGACGGG CTTTATTCCT GCTCTTAAAG ATAATCCGCA TATCTGGGTG CTGCGTTCGC TGACCAAATT TTATGCCATT CCCGGCCTGC GGTTGGGATA TCTCGTCAAT AGCGATGACG CGGCGGTAGC GCGGATGCGT CGCCAACAAA TGCCGTGGTC GATTAACGCG CTGGCGGCGC TGGCCGGTGA GGTAGCGTTA CAGGATAGTG CCTGGCAACA GGCGACCTGG CATTGGTTAC GGGAGGAGGG CGCCCGGTTT TATCAGGCGC TTTGTCAGCT CCCCCTGCTG ACGGTCTATC CCGGGCGGGC AAACTATCTG TTGTTACGCT GTGAGCGAGA GGATATTGAC CTGCAGCGGC GGTTGCTGAC GCAGCGAATT TTAATCCGTA GCTGCGCTAA CTACCCGGGG CTGGACAGCC GCTATTATCG TGTGGCGATA CGCAGCGCTG CGCAAAACGA GCGTCTGCTG GCGGCGCTGC GCAATGTGCT TACCGGTATA ACCCCTGCTG ATTGA
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Protein sequence | MALFNSAHGG NIREAATVLG ISPDQLLDFS ANINPLGMPV SVKRALIDNL DCIERYPDAD YFHLHQALAR HHQVPASWIL AGNGETESIF TVASGLKPRR AMIVTPGFAE YGRALAQSGC EIRRWSLREA DDWQLTDAIL EALTPDLDCL FLCTPNNPTG LLPERPLLQA IADRCKSLSI NLILDEAFID FIPHETGFIP ALKDNPHIWV LRSLTKFYAI PGLRLGYLVN SDDAAVARMR RQQMPWSINA LAALAGEVAL QDSAWQQATW HWLREEGARF YQALCQLPLL TVYPGRANYL LLRCEREDID LQRRLLTQRI LIRSCANYPG LDSRYYRVAI RSAAQNERLL AALRNVLTGI TPAD
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