Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0696 |
Symbol | mrdA |
ID | 6485798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 706420 |
End bp | 708321 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642736109 |
Product | penicillin-binding protein 2 |
Protein accession | YP_002039882 |
Protein GI | 194445890 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.982712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAC AAAATTCTTT TCGTGACTAT ACGGCTGAGT CCGCACTGTT TGTGCGTCGG GCGCTGGTCG CCTTTTTGGG TATTTTGCTG CTGACCGGCG TACTGATCGC CAATTTGTAT AATCTGCAAA TTCTCCGTTT TACCGATTAC CAGACCCGCT CGAACGAAAA CCGTATCAAG CTGGTGCCAA TTGCGCCAAG CCGCGGGATA ATCTACGACC GTAACGGCAT TCCCCTTGCG CTGAACCGCA CTATCTATCA GATTGAAATG ATGCCGGAAA AGGTGGATAA CGTTCAGCAA ACGCTGGATG CGCTACGCAG TGTGGTCGAT TTAAACGACG ACGATATCGC CGCCTTTAAA AAAGAGCGCG CCCGATCCCA TCGCTTTACT TCTATTCCGG TGAAAACAAA CCTGACGGAA GTTCAGGTCG CGCGCTTTGC TGTCAACCAG TACCGTTTTC CGGGCGTCGA AGTCAAAGGC TATAAACGCC GCTATTATCC ATACGGATCG GCGCTGACCC ACGTTATCGG CTACGTATCG AAAATCAATG ATAAAGACGT CGAGCGTCTC GACAGAGAAA ACAAACTGGC GAACTACGCC GCCACCCATG ACATCGGCAA GCTGGGCATT GAGCGCTACT ATGAAGATAT TCTGCATGGT CAAACCGGTT ATGAAGAGGT TGAAGTCAAC AACCGCGGTC GCGTTATTCG CCAACTCAAA GAGGTGCCGC CGCAGGCCGG ACACGATATC TACCTGACGC TGGATCTCAA GCTCCAGCAG TATATTGAAA CGCTGCTGGC AGGCAGTCGC GCGGCGGTGA TTGTCACCGA TCCGCGTACC GGCGGCGTGC TATCGCTGGT CTCCATGCCA AGTTACGACC CTAACCTTTT CGTGGACGGC ATCTCCAGCA AAGATTACTC CGGGCTGCTT AACGACCCGA ACACGCCATT AGTGAACCGC GCGACTCAGG GTGTCTACCC ACCTGCTTCT ACCGTTAAGC CTTACGTCGC CGTATCGGCG TTAAGCGCTG GCGTCATCAC CCGTAACACC AGTCTTTTCG ACCCTGGCTG GTGGCAGTTG CCGGGGTCTG AGAAACGCTA CCGCGACTGG AAAAAATGGG GCCACGGGCA TCTGAATATC ACCAAATCCC TTGAAGAGTC GGCGGATACC TTCTTCTATC AGGTGGCCTA TGACATGGGG ATCGATCGCC TGTCAGAATG GATGGGTAAG TTCGGCTATG GTCACTATAC CGGAATTGAT CTCGCAGAAG AGCGCTCTGG TAATATGCCG ACCCGCGAGT GGAAACAGAA ACGCTTTAAA AAACCGTGGT ATCAGGGCGA TACGATTCCG GTGGGCATCG GCCAGGGCTA CTGGACGGCA ACGCCGATTC AGATGAGTAA GGCGCTGATG ATCCTTATTA ACGACGGCGT AGTTAAAGTC CCGCACCTGT TAATGAGCAC CGCGGAAAAC GGTAAACAGG TGCCGTGGGT ACAGCCGCAT GAGCCGCCGG TGGGCGATAT TCACTCCGGC TACTGGGAAA TTGCGAAAGA TGGCATGTAT GGCGTCGCCA ACCGCCCTAA CGGCACGGCG CATAAATATT TTGCCAGCGC GCCCTATAAA ATCGCGGCGA AGTCGGGCAC CGCGCAGGTC TTTGGCCTGA AGGCCAACGA AACGTACAAT GCGCATAAAA TCGCCGAGCG CCTGCGCGAC CATAAATTAA TGACCGCCTT TGCGCCGTAT AACAATCCCC AGGTTGCCGT CGCGATCATC CTTGAAAACG GCGGTGCAGG CCCGGCAGTA GGCACGATCA TGCGCCAAAT CCTTGATCAC ATCATGCTGG GCGACAACAA CACCCATTTG CCTGCGGAAA ACCCGGTGGT TGCAGCGGCG GAGGACCAAT AA
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Protein sequence | MKRQNSFRDY TAESALFVRR ALVAFLGILL LTGVLIANLY NLQILRFTDY QTRSNENRIK LVPIAPSRGI IYDRNGIPLA LNRTIYQIEM MPEKVDNVQQ TLDALRSVVD LNDDDIAAFK KERARSHRFT SIPVKTNLTE VQVARFAVNQ YRFPGVEVKG YKRRYYPYGS ALTHVIGYVS KINDKDVERL DRENKLANYA ATHDIGKLGI ERYYEDILHG QTGYEEVEVN NRGRVIRQLK EVPPQAGHDI YLTLDLKLQQ YIETLLAGSR AAVIVTDPRT GGVLSLVSMP SYDPNLFVDG ISSKDYSGLL NDPNTPLVNR ATQGVYPPAS TVKPYVAVSA LSAGVITRNT SLFDPGWWQL PGSEKRYRDW KKWGHGHLNI TKSLEESADT FFYQVAYDMG IDRLSEWMGK FGYGHYTGID LAEERSGNMP TREWKQKRFK KPWYQGDTIP VGIGQGYWTA TPIQMSKALM ILINDGVVKV PHLLMSTAEN GKQVPWVQPH EPPVGDIHSG YWEIAKDGMY GVANRPNGTA HKYFASAPYK IAAKSGTAQV FGLKANETYN AHKIAERLRD HKLMTAFAPY NNPQVAVAII LENGGAGPAV GTIMRQILDH IMLGDNNTHL PAENPVVAAA EDQ
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