| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0656 |
|---|
| Symbol | |
|---|
| ID | 6486709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 669290 |
|---|
| End bp | 670459 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642736071 |
|---|
| Product | putative aminotransferase |
|---|
| Protein accession | YP_002039844 |
|---|
| Protein GI | 194444611 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAA TGAGAAATAA CCCACTGATT CCAAAAAGCA AATTGCCAAA TCTTGGTACC
ACGATTTTTA CGCAAATGAG CGCGCTGGCG CAGAAACATC AGGCAATAAA TTTATCGCAA
GGCTTCCCTG ATTTTGATGG TCCTCGTTAT TTGCACGAGC GGTTGGCTTA TCATGTCGCG
CAGGGCGCGA ATCAATATGC GCCGATGACG GGGGCGCAGG CGCTGCGGGA GGCCATTGCC
GATAAAACGG CGGAAATATA TGGTTATCGA CCCGATGACG TCAGTGATAT CACCGTCACA
GCGGGCGCGA CAGAAGCGCT GTATGCGGCG ATTACCGCGC TGGTGCGGGC AGGGGATGAG
GTTATCTGTT TCGATCCCAG TTACGACAGC TATGCCCCAG CCGTGGCGCT CTCCGGCGGC
GTGTTAAAAC GCATAGCGCT TACGCCGCCG CATTTTCGCG TCGACTGGCA GGCGTTTTCG
GCGTTGCTTA GCGAGCGCAC GCGACTGGTG ATCCTCAATA CGCCGCATAA TCCCACCGCT
ACCGTCTGGC GTCAGGCGGA TATCGAGGCG CTGTGGCAGG CTATCGGCGA GCGGGAAATT
TATGTGTTAA GCGATGAAGT GTACGAACAT ATTTGTTTTG CCGTCGAAGG TCATGCCAGC
GTATTGGCGC ACCCTCAGTT ACGAGAGCGG GCGGTTGCCG TTTCATCGTT TGGTAAAACC
TTTCATATGA CAGGATGGAA GATTGGTTAC TGCGTTGCGC CTGCGGCCAT TAGCGCCGAA
ATACGCAAAG TTCATCAGTA CCTGACGTTT TGCGTCAATA CGCCGGCGCA ACTGGCGCTG
GCGGATATGC TGCGCGCCGC GCCGGAACAC TATCGCGCGT TACCCGATTT TTACCGGAAA
AAACGCGATG TGTTGGTTAA CGCGCTGGCG CAAAGCCGAT TAAAAGTGCT GCCCTGTGAA
GGTACCTATT TTCTGTTAAT CGATTACAGC GCAGTGTCGA CGCTAAATGA CGTTGAGTTT
TGTCAGTGGC TAACCGAAGA AGTCGGTGTC GCCGCTATTC CGCTCTCTGT CTTTTGCGCC
GCCCCTTTCC CGCATCAGCT TATACGTTTA TGTTTCGCTA AACAGGAATC AACGCTGCTG
GCCGCCGCAG AGCGCCTGTG TAAACTGTAG
|
|---|
| Protein sequence | MKIMRNNPLI PKSKLPNLGT TIFTQMSALA QKHQAINLSQ GFPDFDGPRY LHERLAYHVA
QGANQYAPMT GAQALREAIA DKTAEIYGYR PDDVSDITVT AGATEALYAA ITALVRAGDE
VICFDPSYDS YAPAVALSGG VLKRIALTPP HFRVDWQAFS ALLSERTRLV ILNTPHNPTA
TVWRQADIEA LWQAIGEREI YVLSDEVYEH ICFAVEGHAS VLAHPQLRER AVAVSSFGKT
FHMTGWKIGY CVAPAAISAE IRKVHQYLTF CVNTPAQLAL ADMLRAAPEH YRALPDFYRK
KRDVLVNALA QSRLKVLPCE GTYFLLIDYS AVSTLNDVEF CQWLTEEVGV AAIPLSVFCA
APFPHQLIRL CFAKQESTLL AAAERLCKL
|
|---|
| |