Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0629 |
Symbol | |
ID | 6482621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 640338 |
End bp | 640808 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642736044 |
Product | PTS system sorbose-specific transporter subunit IIB |
Protein accession | YP_002039817 |
Protein GI | 194444410 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAT TAGTGCGCAT TGATTACCGC CTGCTGCACG GCCAGGTGGT CTTCGCCTGG ACCCGGGCGC TGGATATCGA CCATATCATC GTCGCTAACG CCAACGCCGC CGGCGACGCG TTTGTCTCTA TGTCATTAAG TCTGGCAAAA CCCGCTGGCG TGTCGCTGGA CATTATCACG GTGGAACAGG CGGCGGAAAA ACTCGCCAGC GGCAAGCTGG ATCACAAAAA AGTGATGGTG GTGCTGGGAA ATACCGCCGA AACCCTCGCC TTCGTCGAGA AAGTGCCAGG GATTAGCGTT ATCAACTACG GCGGTATCGC GCAAAAAGAG GGCGCGCAGC AGTTCGGCAA AGCCATATAC CTGACCGAGC AGGAGATTGC CGATAGCCAG GCGCTAAAAG CCAAAGGCAT CCGTCTGGAA ATGCGCCAGG TTCCGGCTCA TTCCGCCGAA TTGCTTAACG ATAAACTCTG A
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Protein sequence | MIKLVRIDYR LLHGQVVFAW TRALDIDHII VANANAAGDA FVSMSLSLAK PAGVSLDIIT VEQAAEKLAS GKLDHKKVMV VLGNTAETLA FVEKVPGISV INYGGIAQKE GAQQFGKAIY LTEQEIADSQ ALKAKGIRLE MRQVPAHSAE LLNDKL
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