Gene SNSL254_A0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0629 
Symbol 
ID6482621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp640338 
End bp640808 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content56% 
IMG OID642736044 
ProductPTS system sorbose-specific transporter subunit IIB 
Protein accessionYP_002039817 
Protein GI194444410 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT TAGTGCGCAT TGATTACCGC CTGCTGCACG GCCAGGTGGT CTTCGCCTGG 
ACCCGGGCGC TGGATATCGA CCATATCATC GTCGCTAACG CCAACGCCGC CGGCGACGCG
TTTGTCTCTA TGTCATTAAG TCTGGCAAAA CCCGCTGGCG TGTCGCTGGA CATTATCACG
GTGGAACAGG CGGCGGAAAA ACTCGCCAGC GGCAAGCTGG ATCACAAAAA AGTGATGGTG
GTGCTGGGAA ATACCGCCGA AACCCTCGCC TTCGTCGAGA AAGTGCCAGG GATTAGCGTT
ATCAACTACG GCGGTATCGC GCAAAAAGAG GGCGCGCAGC AGTTCGGCAA AGCCATATAC
CTGACCGAGC AGGAGATTGC CGATAGCCAG GCGCTAAAAG CCAAAGGCAT CCGTCTGGAA
ATGCGCCAGG TTCCGGCTCA TTCCGCCGAA TTGCTTAACG ATAAACTCTG A
 
Protein sequence
MIKLVRIDYR LLHGQVVFAW TRALDIDHII VANANAAGDA FVSMSLSLAK PAGVSLDIIT 
VEQAAEKLAS GKLDHKKVMV VLGNTAETLA FVEKVPGISV INYGGIAQKE GAQQFGKAIY
LTEQEIADSQ ALKAKGIRLE MRQVPAHSAE LLNDKL