Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0624 |
Symbol | |
ID | 6482150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 633737 |
End bp | 636466 |
Gene Length | 2730 bp |
Protein Length | 909 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642736039 |
Product | AAA superfamily ATPase with N- receiver domain |
Protein accession | YP_002039812 |
Protein GI | 194442284 |
COG category | [K] Transcription |
COG ID | [COG3933] Transcriptional antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.771481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAG AGTCCATATT TCGTCAGTTG GAGCTACGGC TAGCCGGATG TTCACTAACA GCTGACGCGT TAAGCGCGTT TAGCGCAATG GCGATTGCCG ACAGTCTCAG GCAAAAACGC AGCATTATTA GTCACCATCT TAATAACTTG CATCGTGAGC AGCGGGTGGT CAAAGTGAAT AGCCGCCCGG TGCTGTTCCT GCCCGTCGAG GCGCTACGTC GTCACCACCG GCTGGTGGTT CGACAGGGGG ATTACGCGTC CATTCAGGCG CTGTGCGCGG AGCGGCAGGA CAGTCTGGAG CTGCTCATTG GCGCGCAGGG CAGCTTGCAG GAGTCCCTGC GTCAGTGTAA GGCGGCGATC AGTTATCCCG GCGCGGGCTT GCCTTTGCTG CTGCGCGGCC CGACGGGGAC AGGAAAAAGT TTTTTGGCGC GTCAGCTTTG GCAGTACGCC ATCGAGCAGG GCATTTTGCC CCCGGAGGCG CCCTTTACCG TGTTTAACTG CGCCGAATAT GCTAATAACC CGGAATTGCT GACGTCAAAA TTATTTGGTC ATGCCAAAGG TGCTTTTACC GGCGCAGACA GAGCGGTATC CGGGTTAATT GAGACCAGTA ATGGCGGCGT ATTGTTTATC GATGAAGTGC ACCGTTTACC GCCGGAAGGG CAGGAAAAAC TGTTCCATTT TATGGATAAC GGCACCTGGC GTCGCTTAGG CGAAAGCAGC GATGAACGCA GCGCCACGGT ACGCCTGATA TTCGCCTCTA CCGAAGATCT GGAAAAGCAC TTTCTGGCGA CATTTATTCG CCGGATACCG GTCATTGTCA AAATTCTGCC TATCGCCGAA CGCGGACAGT ATGAGCGGCT GGCGTTTATT CACCATTTTT TTCGTCGCGA GGCGCAGCGT CTTCATCACG ATTTGTCGCT GGATAGTGAA ATTATAAGCC AACTGATGCA GGAGACCCTG GAAGGGAATG TCGGCGGCCT GGAAAATCTC ATTCGTAATA TTTACGCCAG CGCCTGGACT TTCGGCCAGC GTGACGATGG GGTACTGGAA GTAAAAGCCG GGCAACTGCC GGATCGTCTG CTGATGGAGG TGCCCTTTAC CGTTCCGCAG ACGGCGGAAC GCGTCATGAT TTATCGCGAA GGTGGCGTTT TTCCGCGAGT TTCCGGTCAG CATCAGGAAT ATTTACGGTT GACGGAAAAC ATTTGCGGCC TGTGCGAAGA GCTGGTGCAG GAGAATATTT CCGCACGGAC GTTTGACAAG CTGGTCTATC AAAACCTTAC GTTATATCTC GATGCCTTAA TGAATAAAGA GAGCCCTCGC GCTCGTCAGG ACAAGCGGCT GCGTTTTATC GAAGATGTCG GGAAAGCGAT CGCTGCACAT TACGATCTCG AACTGAATGC GGAATTCGCT TATCTCACCG GACGTTATCT TACCAGCCTG CCGTTAACGC CGGTGGAGGC GTCGCCATCG GTTCGCCATG TGATGCTGCG CTGGCTGGAG GAGGCGCCGG GGCTGGCGCA GCGTGTGGCG CAAAAACTGC TGGACGTGGT AAATAATAAA TATGATTTGT TAATCGACAC GCTCGACAGA CTGGTCGTGG CGGCCATCGT CAGTAATGCC ATTGACGCCA CCAGCGGCGG TAAGGTAAAA GCGCTGATCA TCGCGCATGG TTATTCGACT GCCAGCAGCA TTGCAGGCGT GGCGAACCGT CTGATTGGCG AAAAGATTTA TCATGCGATG GATATGCCGA TGGAGGTCGC GTTTAGCGAT GTCAGCCGGG CCATTGTCGA TTATCTCCAG CATACGGATA CCCGCGCAGG CGTCATGGTG CTGATCGATA TGGGATACAC CAAAGAGATC GCCGATGCGC TTTTGAGCGT AATTCATGGC CCGCTGGTGG TGGTCGATAA CGTTACGACG CGTCTGGCGC TGAACGTGGC CAGCGAGATC GCGCTGCAAA AAAACATCGA ACAGATCGCC GAAGAGATCG TCCCGTTAAA TCAGTCGCGC TGGGATGTCT TCTGGCCCGC GCAGAAAAAA GCACGCGCGC TGCTGGTGAC CTGTATTACC GGCATCGGGA CGGCGTTTAA ATTTAAAAAT TTGATGGAAA AAAGTCAGTT GACCGACTTT GATATTAATA TTATCGCCTG TGAATATACT CGCCTGAAAA ACAGCCGGAT GGCGGCCTCG TTGCTGAATC AGTATGAAGT GATTGCGGTT GTCGGCACTA TTGACCCGCA GCTGGCGGGC GTTCCCTGGG TGGGGATTGA AGAGCTGCTT GGCGAGCAGG GGTATGCGCA TTTAAGTCAG TTATTAAGCG GTTATCTTAA CGATAAACAA ATTGCGTTAA TTAATAAAAA TATGGTTCGC GAATTTTCGT TGCATAATGT GGTTAATTCG CTGACCATTC TCAATGCCAA TAAGACGATA GGGCATATCG AAACGATTAT TGCCGAATGG CAAAACACGC TGGGCTTCAG CTTTAATAAT AATTTGATTA TTAGTTTATA TGTTCATTTG AGCTGTATGA TTGAGCGGCT GGTCATGCGC AATGAAATTA CCCACTATAA AAACATGACG GAATTTAACG AGCGGCATGG TGAATTTATC GCGATGGTAA ATCATTCGTT TCAGCGGTTG AAAATTCTTT ATAACGTGGC GCTGCCGGTA GCGGAAATTG GCTATATCCA CGATATTTTC GAATTACGGA TAGAGGATTT TCGCTGGTAG
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Protein sequence | MNKESIFRQL ELRLAGCSLT ADALSAFSAM AIADSLRQKR SIISHHLNNL HREQRVVKVN SRPVLFLPVE ALRRHHRLVV RQGDYASIQA LCAERQDSLE LLIGAQGSLQ ESLRQCKAAI SYPGAGLPLL LRGPTGTGKS FLARQLWQYA IEQGILPPEA PFTVFNCAEY ANNPELLTSK LFGHAKGAFT GADRAVSGLI ETSNGGVLFI DEVHRLPPEG QEKLFHFMDN GTWRRLGESS DERSATVRLI FASTEDLEKH FLATFIRRIP VIVKILPIAE RGQYERLAFI HHFFRREAQR LHHDLSLDSE IISQLMQETL EGNVGGLENL IRNIYASAWT FGQRDDGVLE VKAGQLPDRL LMEVPFTVPQ TAERVMIYRE GGVFPRVSGQ HQEYLRLTEN ICGLCEELVQ ENISARTFDK LVYQNLTLYL DALMNKESPR ARQDKRLRFI EDVGKAIAAH YDLELNAEFA YLTGRYLTSL PLTPVEASPS VRHVMLRWLE EAPGLAQRVA QKLLDVVNNK YDLLIDTLDR LVVAAIVSNA IDATSGGKVK ALIIAHGYST ASSIAGVANR LIGEKIYHAM DMPMEVAFSD VSRAIVDYLQ HTDTRAGVMV LIDMGYTKEI ADALLSVIHG PLVVVDNVTT RLALNVASEI ALQKNIEQIA EEIVPLNQSR WDVFWPAQKK ARALLVTCIT GIGTAFKFKN LMEKSQLTDF DINIIACEYT RLKNSRMAAS LLNQYEVIAV VGTIDPQLAG VPWVGIEELL GEQGYAHLSQ LLSGYLNDKQ IALINKNMVR EFSLHNVVNS LTILNANKTI GHIETIIAEW QNTLGFSFNN NLIISLYVHL SCMIERLVMR NEITHYKNMT EFNERHGEFI AMVNHSFQRL KILYNVALPV AEIGYIHDIF ELRIEDFRW
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