| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0600 |
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| Symbol | |
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| ID | 6483140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 613055 |
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| End bp | 614062 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642736017 |
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| Product | mannose binding protein FimH |
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| Protein accession | YP_002039791 |
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| Protein GI | 194442424 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.282698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.11786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAT ACTCAGCGCT ATTGCTGGCG GGGACCGCAC TCTTTTTCAC CCATCCCGCG
CTGGCGACGG TTTGCCGTAA TTCAAACGGG ACGGCGACCG ATATCTTTTA TGACCTGTCA
GATGTTTTCA CCAGCGGCAA TAATCAGCCG GGACAGGTGG TGACGCTGCC GGAAAAATCA
GGTTGGGTCG GCGTAAACGC GACGTGCCCG GCGGGGACAA CGGTAAATTA TACCTACCGA
AGCTATGTAT CAGAATTACC GGTACGAAGC ACCGAAGGAA ATTTTAAATA CCTCAAGCTG
AATGACTACC TTCTGGGCGC GATGAGCATC ACCGATAGTG TCGCTGGCGT ATTTTATCCG
CCCCGTAACT ATATTCGCAT GGGCGTCGAC TCTAACGTGT CGCAGCAAAT GCCGTTTGGC
GTGCAGGACT CAAAGCTGGT TTTTAAATTA AAAGTGATAC GGCCTTTTAT TAATATGGTG
ACGATCCCTC GCCAGACAAT GTTTACTGTC TATGTGACGA CCTCTACCGG CGACGCGTTG
AGCACGCCGG TATATACCAT TAGCTACAGC GGCAAAGTGG AAGTGCCGCA AAACTGCGAA
GTGAATGCCG GACAGGTCGT GGAGTTTGAT TTCGGCGATA TCGGCGCGTC GTTATTTAGT
CAGGCGGGGG CGGGTAATCG TCCGCAAGGC GTCACGCCGC AAACGAAAAC TATCGCTATT
AAATGTACCA ACGTCGCGGC GCAAGCCTAT TTATCGATGC GGCTTGAAGC CGAAAAGGCC
TCAGGGCAGG CGATGGTGTC CGATAATCCG GATTTAGGCT TTGTGGTTGC TAATAGCAAC
GGTACGCCGC TCACACCCAA TAATTTGTCG AGTAAAATTC CGTTTCATCT TGATGATAAC
GCCGCCGCTC GCGTAGGTAT TCGCGCCTGG CCGATCAGCG TGACGGGGAA TAAACCGGTG
GAAGGGCCGT TTACTGCGCG CGGCTATCTA CGAGTCGATT ATGATTAA
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| Protein sequence | MKIYSALLLA GTALFFTHPA LATVCRNSNG TATDIFYDLS DVFTSGNNQP GQVVTLPEKS
GWVGVNATCP AGTTVNYTYR SYVSELPVRS TEGNFKYLKL NDYLLGAMSI TDSVAGVFYP
PRNYIRMGVD SNVSQQMPFG VQDSKLVFKL KVIRPFINMV TIPRQTMFTV YVTTSTGDAL
STPVYTISYS GKVEVPQNCE VNAGQVVEFD FGDIGASLFS QAGAGNRPQG VTPQTKTIAI
KCTNVAAQAY LSMRLEAEKA SGQAMVSDNP DLGFVVANSN GTPLTPNNLS SKIPFHLDDN
AAARVGIRAW PISVTGNKPV EGPFTARGYL RVDYD
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