| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0501 |
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| Symbol | ppiD |
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| ID | 6486724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 513063 |
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| End bp | 514934 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642735921 |
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| Product | peptidyl-prolyl cis-trans isomerase (rotamase D) |
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| Protein accession | YP_002039695 |
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| Protein GI | 194442454 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0861899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA GCTTACGCAC GGCTGCAAAC AGTCTCGTGC TCAAGATTAT TTTCGTTATC
ATTATCGTGT CGTTCATTTT GACCGGCGTT AGTGGTTACC TGATTGGCGG AAGCAATAAC
TACGCCGCAA AAGTGAATGG CCAGGAAATC AGCCGGGCAC AGTTTGAGAA TGCGTTTAAC
AACGAACGTA ACCGTATGCA GCAGCAGTTG GGCGACAGGT ATTCTGAACT GGCGGCCAAC
GAAGGTTATA TGAAAAGCCT GCGCCAGCAG GTGCTGAATC GTCTGATAGA TGAAGCGCTG
TTGGATCAAT ATTCCCGCGA ACTGAAACTG GGCATCAGCG ATGAGCAGGT AAAACAGGCG
ATTTTCGCCA CTCCCGCTTT TCAGGTGGAC GGTAAGTTTG ACAACAACCG CTATAACGCG
ATTGTGAATC AGATGGGAAT GACCGCCGAT CAGTACGCTC AGGCGCTGCG TAACCAGCTT
ACCACTCAGC AACTGATCAA CGGCGTGGCC GGTACTGATT TTATGCTGAA AGGGGAAACC
GACGAACTGG CGGCATTAGT CTCTCAACAG CGCGTGGTGC GTGAAGCCGT TATTGATGTC
AACGCGCTGG CGGCGAAGCA GCAGGTGACC GATCAGGAAG TGTCCAGCTA CTACGATCAG
AATAAAGTCC GCTTTATGAC TCCGGAACAG TTCCGCGTAA GCTATATCAA GCTGGATGCC
GCGACGATGC AGGCACCGGT CAGCGATGCG GATATTCAGG CCTATTATGA CCAGCATGTA
GATCAGTTTA CTCAGCCGGA GCGCATTCGT TACAGCATTA TTCAGACCAA AACGGAAGAT
GATGCGAAAG CGGTACTGGA TGCGCTGAAC AAGGGCGAAG ATTTCGCCAC GCTGGCGAAA
GAGAAATCTA CCGATATCAT CTCTGCGCGT AATGGCGGCG ATATGGGCTG GCTGGAAGAG
TCTGCCACGG TGCCGGAACT GAAAAACGCC GGATTAAAAG AAAAAGGCCA GATATCTGGC
GTGATTAAGT CGTCTGTCGG TTTTCTGGTG GCGCGTCTGG ATGATATTCA GCCTGCCAAA
GTGAAACCGT TAAGCGAGGT TCGCGACGAC ATTGCCGCGA AAGTGAAACA GGAAAAAGCG
CTGGATGCTT ACTATGCGTT GCAGCAGAAG GTGAGCGATG CGGCAAGCAA CGACAATGAG
TCGTTAGCAG GCGCTGAACA GGTCGCTGGC GTAAAAGCAG TTGAAACCGG CTGGTTTAGC
CGTGACACCT TACCGGAAGA GCTGAACTTC AAACCGGTAG CCGATGCTAT CTTTAATGGC
GGTCTGGTAG GCGAAAACGG TACGCCGGGG CCGAATTCAG ACATTATCAC CGTAGATGGC
GACCGGGCTT TTGTTGTGCG CGTGAGCGAA CATAAACCTG AAGCCGTGAA GCCGTTGGCA
GAAGTGAAAG AACAGGTCAC TGCCCTGGTG AAGCATAACA AAGCGGAACA ACAGGCGAAG
CTGGATGCGG AAAAACTGCT GGTCGAGCTG AAAGCGGGCA AAGGCGCGGA AGCGATGAAA
GCGGCGGGTC TGAGTTTTGG CGAGCCTAAA ACGTTAAGTC GTACCAGTCA GGATCCGGTG
AGTCAGGCGG CCTTTGCGTT AAGCCTTCCG ACGAAAGATA AGCCAGTTTA TGGCGTGGCG
AACGATATGC AGGGTAACGT CGTTCTGCTG GCGTTTGACG AGGTGAAAGC GGGCGCCATG
CCGGAAGCGC AGAAAAAAGC GATGGTGCAG GGCATCACGC AGAACAATGC GCAAATTGTC
TTTGAGGCGC TGATGAGCAA TCTGCGTAAA GAGGCGAAAA TCAAAATCGG CGACGCTCTG
GAACAGCAGT AA
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| Protein sequence | MMDSLRTAAN SLVLKIIFVI IIVSFILTGV SGYLIGGSNN YAAKVNGQEI SRAQFENAFN
NERNRMQQQL GDRYSELAAN EGYMKSLRQQ VLNRLIDEAL LDQYSRELKL GISDEQVKQA
IFATPAFQVD GKFDNNRYNA IVNQMGMTAD QYAQALRNQL TTQQLINGVA GTDFMLKGET
DELAALVSQQ RVVREAVIDV NALAAKQQVT DQEVSSYYDQ NKVRFMTPEQ FRVSYIKLDA
ATMQAPVSDA DIQAYYDQHV DQFTQPERIR YSIIQTKTED DAKAVLDALN KGEDFATLAK
EKSTDIISAR NGGDMGWLEE SATVPELKNA GLKEKGQISG VIKSSVGFLV ARLDDIQPAK
VKPLSEVRDD IAAKVKQEKA LDAYYALQQK VSDAASNDNE SLAGAEQVAG VKAVETGWFS
RDTLPEELNF KPVADAIFNG GLVGENGTPG PNSDIITVDG DRAFVVRVSE HKPEAVKPLA
EVKEQVTALV KHNKAEQQAK LDAEKLLVEL KAGKGAEAMK AAGLSFGEPK TLSRTSQDPV
SQAAFALSLP TKDKPVYGVA NDMQGNVVLL AFDEVKAGAM PEAQKKAMVQ GITQNNAQIV
FEALMSNLRK EAKIKIGDAL EQQ
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