Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0488 |
Symbol | cyoC |
ID | 6486563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 498980 |
End bp | 499594 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642735909 |
Product | cytochrome o ubiquinol oxidase subunit III |
Protein accession | YP_002039683 |
Protein GI | 194446076 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | [TIGR02842] cytochrome o ubiquinol oxidase, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.128023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.00584206 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAACTG ATACTTTAAC GCACGCGACT GCCCACGCGC ACGAACACGG GCACCATGAC GCAGGCCAGA ACAAAATCTT CGGATTTTGG GTCTACCTGA TGAGCGACTG CATTCTGTTC TCTATTCTGT TTGCTACCTA TGCCGTTCTG GTGAACGGCA CCGCTGGCGG CCCGACAGGT AAGGACATTT TCGAACTGCC GTTCGTTCTG GTTGAAACCT TCCTGCTGTT ATTTAGCTCC ATTACCTACG GCATGGCGGC GATCGCCATG CACAAGAACA ACAAGAGCCA GGTTATCTCC TGGCTGGCGT TGACCTTCTT GTTTGGCGCC GGATTTATCG GGATGGAACT CTATGAATTC CATCACCTGA TTGTTAACGG TATGGGCCCG GATCGCAGCG GCTTCCTGTC TGCGTTCTTC GCGCTGGTCG GCACGCACGG TCTGCACGTC ACTTCCGGTT TGATCTGGAT GGCGGTGCTG ATGGTGCAAG TTGCCCGTCG CGGTCTGACC AGCACTAACC GTACCCGCAT CATGTGTCTG AGCCTGTTCT GGCACTTCCT GGATGTGATT TGGATTTGCG TATTCACTGT TGTTTATCTG ATGGGGGCGA TGTAA
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Protein sequence | MATDTLTHAT AHAHEHGHHD AGQNKIFGFW VYLMSDCILF SILFATYAVL VNGTAGGPTG KDIFELPFVL VETFLLLFSS ITYGMAAIAM HKNNKSQVIS WLALTFLFGA GFIGMELYEF HHLIVNGMGP DRSGFLSAFF ALVGTHGLHV TSGLIWMAVL MVQVARRGLT STNRTRIMCL SLFWHFLDVI WICVFTVVYL MGAM
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