| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0486 |
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| Symbol | cyoE |
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| ID | 6485571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 497749 |
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| End bp | 498636 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642735907 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_002039681 |
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| Protein GI | 194445009 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.55861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.0113191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGC AATACCTGCA AGTAACGAAA CCAGGCATCA TCTTTGGCAA CCTGATCTCG
GTGATCGGGG GATTTCTGCT GGCTTCAAAG GGCAGCATTG ACTATCCCCT GTTCATCTAT
ACGCTGGTCG GGGTGTCACT GGTTGTGGCG TCGGGTTGTG TATTTAACAA CTACATCGAC
AGGGATATCG ACAGGAAGAT GGAAAGGACC AAGAATCGGG TGCTGGTCAA AGGCCTGATT
TCTCCTGGCG TCTCGCTGGT ATACGCCACC CTGCTGGGTA TTGCTGGCTT TATGCTGCTG
TGGTTTGGCG CTAATCCTCT GGCCTGCTGG CTGGGGGTGA TGGGCTTCGT GGTCTACGTT
GGCGTGTACA GCTTGTACAT GAAGCGTCAC TCCGTCTACG GAACGCTGAT TGGTTCTCTC
TCCGGCGCAG CGCCGCCGGT GATTGGCTAC TGCGCCGTAA CGGGCGACTT TGATAGCGGC
GCGGCGATCC TGTTGGCTAT TTTCAGCCTC TGGCAGATGC CGCACTCTTA CGCCATCGCC
ATTTTCCGCT TTAAGGACTA TCAGGCGGCC AATATCCCGG TTCTGCCGGT GGTAAAAGGA
ATCTCAGTCG CTAAAAACCA CATAACGCTG TACATCATTG CGTTTGCCGT TGCAACGCTA
ATGCTAACGT TGGGCGGTTA TGCCGGTTAC AAATACCTGG TGGTCGCCGC GGCGGTCAGC
GTTTGGTGGC TCGGCATGGC GCTACGCGGT TACAAAGTGG AAGATGATAA GGTCTGGGCG
CGTAAGCTGT TCGGCTTCTC TATCATTGCG ATTACTGCGC TGAGTATCAT GATGTCCGTT
GATTTTATGG TGCCGAATTC GCAGAATCTG CTGACTTACG TCTGGTAA
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| Protein sequence | MFKQYLQVTK PGIIFGNLIS VIGGFLLASK GSIDYPLFIY TLVGVSLVVA SGCVFNNYID
RDIDRKMERT KNRVLVKGLI SPGVSLVYAT LLGIAGFMLL WFGANPLACW LGVMGFVVYV
GVYSLYMKRH SVYGTLIGSL SGAAPPVIGY CAVTGDFDSG AAILLAIFSL WQMPHSYAIA
IFRFKDYQAA NIPVLPVVKG ISVAKNHITL YIIAFAVATL MLTLGGYAGY KYLVVAAAVS
VWWLGMALRG YKVEDDKVWA RKLFGFSIIA ITALSIMMSV DFMVPNSQNL LTYVW
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