Gene SNSL254_A0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0475 
SymbolphnT 
ID6483056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp485430 
End bp486539 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content59% 
IMG OID642735896 
Product2-aminoethylphosphonate ABC transport system ATP-binding component PhnT 
Protein accessionYP_002039670 
Protein GI194442326 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR03258] 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.47979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATGA AAACGACTGC CGTTCACGTC CCTGCATCGC AGGGGACATC GGGCATAGTC 
CTCGACTCGC TGCGCGTTGC GTATCACGGC AACGTGGTGC TTAAACCGCT CTCTTTGACG
ATTGAACCTG GCGAAGTGCT GGCGCTGATT GGCCCATCAG GATCTGGAAA AACGACGGTG
CTGCGTGCGG TTGCGGGCTT TGTGCAACCT GCAGGCGGTC GTATTCTGAT TGGCGATACG
GACGTCACCC ATCTGCCACC CTATAAACGC GGGTTGGCGA TGGTGGTGCA GAACTACGCC
TTGTTCCCGC ATCTGAAAGT GGAAGACAAC GTCGCTTTTG GCCTGCGTGC GCAGAAGCAG
CCAAAGGCGC TAATTAATGA GCGTGTAACG CAGGCGCTGA AAACGGTTGG CATGAGTGAT
TACGCCGCCC GTTATCCGCA TCAACTTTCC GGCGGCCAGC AGCAACGCGT GGCCATCGCC
CGCGCGATTG CCGTGCGCCC GCGCGTGCTG TTGCTGGATG AACCACTGTC AGCGCTGGAC
GCACAGATTC GTCATAATAT GGTGGAAGAA ATCGCCTGTC TTCACCGTGA GCTGCCGGAA
CTCACTATTC TCTACGTCAC CCACGATCAA ACGGAAGCGC TCACCCTGGC CGATAAAATC
GGCATTATGA AGGATGGCTC GCTGATTGCT CACGGCGAAA CCCGCGCGCT ATATCAGCAT
CCGCCCAATC GTTTTGCCGC CGAATTCTTA GGTCGCGCCA ATATTCTCTC CGCCATCGCG
CTGGGGATAA CGGAGGCTCC GGGGCTGGTG GACGTCAGCT GCGGCGGTGC GGTGATTCGC
GCGTTCAGCC GGGGCAGCCA CCACGGTTAC AACAAACTGC TGTGCATTCG TCCTCAGCAC
CTCAGCCTGA CGCCGCGTTC GGCCTACAGC AACCGCTTCA ACGCCACACT GCAATCGGTG
CACTGGCAGG GCGATTTAAC CCATCTGCTG TGTGACGTTG CTGGCGAAAC GGTGCGGATG
GTGTTGACGC ATGTCAATCC GCTGCCGCGC GTGGGCGACA AGCTGGCGCT GTGGTTCGAA
CCGGATGATG CGGTCCTGAT TGAGGTATAA
 
Protein sequence
MLMKTTAVHV PASQGTSGIV LDSLRVAYHG NVVLKPLSLT IEPGEVLALI GPSGSGKTTV 
LRAVAGFVQP AGGRILIGDT DVTHLPPYKR GLAMVVQNYA LFPHLKVEDN VAFGLRAQKQ
PKALINERVT QALKTVGMSD YAARYPHQLS GGQQQRVAIA RAIAVRPRVL LLDEPLSALD
AQIRHNMVEE IACLHRELPE LTILYVTHDQ TEALTLADKI GIMKDGSLIA HGETRALYQH
PPNRFAAEFL GRANILSAIA LGITEAPGLV DVSCGGAVIR AFSRGSHHGY NKLLCIRPQH
LSLTPRSAYS NRFNATLQSV HWQGDLTHLL CDVAGETVRM VLTHVNPLPR VGDKLALWFE
PDDAVLIEV