Gene SNSL254_A0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0462 
SymbolnrdR 
ID6483678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp473795 
End bp474244 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content50% 
IMG OID642735883 
Producttranscriptional regulator NrdR 
Protein accessionYP_002039657 
Protein GI194446615 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTGCC CATTTTGTTT CGCCGTAGAT ACCAAAGTCA TTGACTCTCG TCTTGTAGGC 
GAGGGCTCGT CCGTGCGCCG CCGTCGGCAG TGCCTGGTGT GTAATGAACG CTTTACGACC
TTTGAAGTGG CTGAACTGGT CATGCCGCGC GTGATAAAAA GCAACGATGT GCGCGAACCC
TTTAATGAGG ATAAGCTGCG TAGCGGCATG TTGAGAGCGC TGGAAAAAAG ACCCGTCAGC
GCAGATGATG TTGAAATGGC ATTGAACCAT ATTAAGTCAC AATTACGTGC CACTGGGGAG
CGTGAAGTTC CCAGCAAGAT GATTGGCAAC CTGGTCATGG AGCAGCTGAA AAAACTCGAT
AAAGTCGCGT ATATTCGCTT TGCCTCCGTC TATCGCAGTT TCGAAGATAT CAAAGACTTT
GGCGAAGAAA TCGCTCGCCT ACAGGACTAA
 
Protein sequence
MHCPFCFAVD TKVIDSRLVG EGSSVRRRRQ CLVCNERFTT FEVAELVMPR VIKSNDVREP 
FNEDKLRSGM LRALEKRPVS ADDVEMALNH IKSQLRATGE REVPSKMIGN LVMEQLKKLD
KVAYIRFASV YRSFEDIKDF GEEIARLQD