| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0444 |
|---|
| Symbol | brnQ |
|---|
| ID | 6484808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 457660 |
|---|
| End bp | 458979 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642735866 |
|---|
| Product | branched-chain amino acid transport system II carrier protein |
|---|
| Protein accession | YP_002039640 |
|---|
| Protein GI | 194445513 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1114] Branched-chain amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 104 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATC AGTTAAAATC GCGCGATATC ATCGCCCTGG GCTTTATGAC ATTTGCGCTG
TTCGTTGGCG CAGGCAATAT TATCTTTCCT CCTATGGTCG GTTTGCAGGC GGGTGAACAC
GTCTGGACAG CCGCTATTGG CTTTCTGATT ACCGCCGTAG GGCTACCGGT TCTTACTGTT
GTGGCGCTGG CGAAAGTCGG CGGCGGCGTA GACAGCCTCA GTACGCCGAT TGGTAAAGTG
GCGGGACTCC TGCTGGCGAC CGTTTGCTAT CTGGCCGTCG GGCCGTTATT TGCGACGCCG
CGTACCGCGA CGGTGTCGTT TGAGGTCGGT ATCGCTCCGT TGACCGGCGA TTCTGCAATG
CCGTTGCTGA TTTACAGCGT GGTCTATTTC GCTATTGTTA TTCTGGTTTC CCTCTATCCG
GGTAAGCTGC TGGATACGGT AGGGAATTTC CTGGCGCCGT TGAAAATTAT TGCGCTGGTC
ATCCTTTCCG TCGCGGCTAT CGTTTGGCCT GCCGGTCCAA TCAGCAACGC CCTGGACGCT
TATCAGAATG CGGCCTTTTC TAACGGATTT GTGAACGGCT ATCTGACGAT GGATACGCTG
GGCGCGATGG TGTTTGGTAT CGTTATTGTG AACGCGGCGC GTTCTCGCGG CGTGACCGAA
GCGCGCCTGT TGACGCGTTA CACGGTCTGG GCCGGCCTGA TGGCGGGCGT GGGGCTGACG
CTGCTTTACC TTGCCTTGTT CCGCTTAGGT TCTGATAGCG CGACGCTGGT CGATCAGTCA
GCGAACGGCG CGGCGATTCT TCATGCCTAC GTTCAGCATA CCTTTGGCGG CGCGGGAAGC
TTCCTGCTGG CGGCGCTGAT CTTTATCGCG TGTCTGGTGA CGGCGGTGGG GCTGACCTGC
GCCTGCGCTG AGTTTTTCGC GCAGTATATT CCGCTGTCTT ACCGCACGCT GGTCTTTATT
CTCGGCGGCT TCTCTATGGT GGTGTCAAAC CTCGGACTGA GCCATCTGAT TCAAATCTCC
ATTCCGGTGC TGACGGCTAT CTATCCGCCA TGTATCGCAC TGGTTGTATT AAGTTTTACC
CGCTCATGGT GGCATAATTC CACCCGTATC ATCGCGCCGG CCATGTTTAT CAGTCTGCTT
TTTGGTATCC TTGACGGCAT CAAAGCATCT GCCTTTGGCG ATATGCTGCC AGCCTGGAGT
CAGCGTTTGC CGCTGGCGGA ACAGGGACTG GCGTGGTTGA TGCCAACGGT GGTGATGGTG
ATCCTGGCGA TTATCTGGGA TCGCGCGGCG GGTCGGCAGG TGACCTCCAG CGCTCACTAA
|
|---|
| Protein sequence | MTHQLKSRDI IALGFMTFAL FVGAGNIIFP PMVGLQAGEH VWTAAIGFLI TAVGLPVLTV
VALAKVGGGV DSLSTPIGKV AGLLLATVCY LAVGPLFATP RTATVSFEVG IAPLTGDSAM
PLLIYSVVYF AIVILVSLYP GKLLDTVGNF LAPLKIIALV ILSVAAIVWP AGPISNALDA
YQNAAFSNGF VNGYLTMDTL GAMVFGIVIV NAARSRGVTE ARLLTRYTVW AGLMAGVGLT
LLYLALFRLG SDSATLVDQS ANGAAILHAY VQHTFGGAGS FLLAALIFIA CLVTAVGLTC
ACAEFFAQYI PLSYRTLVFI LGGFSMVVSN LGLSHLIQIS IPVLTAIYPP CIALVVLSFT
RSWWHNSTRI IAPAMFISLL FGILDGIKAS AFGDMLPAWS QRLPLAEQGL AWLMPTVVMV
ILAIIWDRAA GRQVTSSAH
|
|---|
| |