| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0321 |
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| Symbol | |
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| ID | 6485684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 335799 |
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| End bp | 339878 |
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| Gene Length | 4080 bp |
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| Protein Length | 1359 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642735753 |
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| Product | Rhs family protein |
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| Protein accession | YP_002039528 |
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| Protein GI | 194443828 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG3209] Rhs family protein
[COG4104] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.73436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.000636537 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATGAAG CAGCCCGTGT GGATGACCCA ATCTACCACA CCAGTGCGCT CGCCGGGTTT
CTTATCGGCG CTATCATCGG CATCGCCATT ATCGCGCTTG CCGCCTTTGC CTTCTTTAGC
TGCGGTTTTC TTGCCGGGCT GATTCTGGGT TTTATGGCCG ATCAAATAGC CTCCGGGGTA
TTGCAACTGG GCGAGGCCAT CGGGCGCTCC AACCACCACA CGGCAGGAAA AATCCTCACC
GGTTCGGAGA ATGTCAGCAC CAACAGTCGC CCGGCGGCGC GCGCGGTACT GAGTACGGTG
AAATGCGATA ACCATATCGC AGAAAAACGC ATCGCCCAGG GGTCGGAAAA TATCTACATT
AACAGCCAGC CTGCCGCCCG TAAGGATGAC CACACCGAAT GCGACGCGGT GATTGAAGAC
GGTTCGCCGA ATGTGTTTCT CGGCGGCGGC ACACAGACGG TACTGGAAAT CAGTTCTGAA
ATTCCGGACT GGCTGCGCAA GGTGGTGGAT GTATTGTTTG TCGTGGCGAG TCTGCTCGGC
GGGCTGGCCG GGGCGTGGCG GCAGGCGGCA AAGCTGGGGA CGAAATTTGG CACTAAATGT
GCCGCTAAGT TTATCGGCGG GGAGCTTGTC GGGATGGCCG TGGGTGAGGC TATCAGCGGG
CTGTTCAGCA ATCCGGTGGA TGTGACCACC GGGCAGAAAA TCCTGCTGCC GGAAACGGAC
TTCACTCTGC CCGGTCGCCT GCCGGTCACC TGCTCGCGTT TTTACGCCAG CCACCTGGAA
ACTGTGGGAC TGTTGGGACG GGGCTGGCGG CTGAACTGGG AAACCAGCCT GCGCGAGGAC
GATGAACACA TCACGCTGAC CGGCGTACAG GGGCGGGAAC TGCGTTACCC GAAAACGATG
CTGACGCCCG GCCACCAGAT ATTTGACCCG GAAGAACAGT TATACCTCAG CCGCCTGCAT
GACGGGCGTT ACGTGCTGCA TTACACCGAT CGCAGCTATT ACGTATTTGG TGATTTTGAC
AGTGACGGCA TGGCATACCT GCTGTTTATG GAGACGCCGC ACCGCCAGCG CATTGTCTTC
GGGCACGAAG GAGGCAGACT GGTACGGATA GCCTCCAGCA GCGGGCATCA CCTGTTACTG
CACCGCACAC AGACCCCGGC AGGGGAGCGG CTGTCGCGAA TTGAACTGGT GCAGGGCGGC
ACCCGTGGCA ATCTGGTGGA GTACCGGTAT GACGATAACG GTCAACTGAC CGGCGTGGTG
AACCGGGCGG GAACGCAGGT GCGGCAGTTT GCTTATGAAA ACGGGCTGAT GACGGCGCAC
AGCAATGCGG CGGGGTTCAC CTGCCGCTAC CGCTGGCAGG AACTCGACGG CGCGCCGCGC
GTGACGGAGC ACGACACCAG TGACGGTGAA CATTACCGCT TTGACTATGA TTTTGCCGCA
GGCACCACCA CCGTCACCGG CAGGCAGGGG GAGTCATGGC AGTGGTGGTA CGACAGGGAG
ACGTATATCA CCGCGCACCG GACGCCGGGC GGTGGAATGT ACCGCTTCAC GTACAACGAA
GACCACTTCC CTGTCAACAT TGAGCTGCCC GGCGGTCGCA CGGTGGCGTA TGAATATGAC
ATCCAGAACC GGGTGGTGAA GACGACAGAT CCGGAAGGCC GGGTGACGCA GACGCAGTGG
AACGGCGAGT TCGACGAAAT CACGCGCACG GCGCTGGACG ATGACGCTGT CTGGAAAACG
CAGTACAACG CCCACGGCCA GCCAGTGCAG GAGACGGACC CGGAAGGGCG GGTGACGCAG
TACGCTTACG ATGAACAGGG GCAGATGTGC AGCCGGACGG ATGCGGCGGG CGGCACGGTG
GTGACGGCGT TCGACAGCCG GGGGCAGATG ACGCGGTACA CCGACTGTTC AGGGCGCAGC
ACAGGATATG ACCACGATGA GGACGGCAAC CTGACGCGGG TGACGGACGC GGAAGGGAAG
GTGGTACGCA TCAGCTACAA CCGACTTGGG TTGCCGGAGA CGGTGAACTC ACCGGGGAAA
CAGCAGGACA GGTATACCTG GAATGCGCTG GGGCTGATGA GCAGCCACCG GCGCATCACG
GGGAGCGTGG AGAGCTGGCG GTATACGCCG CGCGGTCTGC TGGCGGCGCA CACGGATGAG
GAGAAGCGCG AGACGCGCTG GCAGTACACG CCGGAAGGCC GGGTGGCAGC GCTGACCAAC
GGCAACGGGG CGCAGTACCG GTTCAGTCAC GATGCGGACG GCAGGCTGGT GCGTGAGGTG
CGCCCGGACG GACTGAGCCG TACTTTTATC CTGGACGACA GCGGTTATCT GACGGCGATA
CAGACCACGG GCACGCAGGG CGGCGTGCGG CGGGAGACGC AGCAGCGGGA TGCGCTGGGC
CGTCTGTTAC GGACGGAGAA TGAACACTGC CAGCGGACGT TCAGCTACAA CCGGCTGGAC
CAGATAACGG CAGTGACGCT CACGCCCACG GAGGCGGGGC AACAGCAGCA CCGGATGCAG
GCCGACACGG TGCGTTTTGA GTATGACCGC AGCGGCTGGC TGACGGCGGA GCACGCGGGG
AACGGCAGCA TACGTTATCA GCGCGACGCG CTGGGCAACC CGACGGACAT CACGCTGCCG
GACGGGCAGC ACCTGACGCA TCTGTATTAC GGGAGCGGGC ATCTGTTACA GACGGCGCTG
GACGGCCTGA CGGTGAGCGA GTATGAGCGC GACAGCCTGC ACCGTCAGAT AATGCGCACG
CAGGGGCAGC TTGCGACGTA CAGCGGCTAT GACGACGACG GGCTGCTGAG CTGGCAGCGC
AGCCTGGCGC CCGGCAGTGC CCCTGTTCTT CCCGGCCAGC GCCCGGCGCG GCAGGGCTGC
GTGACGTCGA GGGACTATTA CTGGAACAAC CACGGCGAGG TGGGCACGAT TGACGACGGC
CTGCGTGGCA GCGTGGTGTA CAGCTATGAC AGAAGCGGTT ACCTGACCGG GCGCTCAGGT
CAGATGTATG ACCATGACCG TTATTATTAC GATAAGGCGG GCAACCTGCT GGATAACGAA
GGGCAGGGTC CGGTGATGAA CAACCGGCTG CCGGGCTGTG GTCGTGACCG TTACGGTTAT
AACGAGTGGG GCGAGCTGAC CACGCGGCGC GACCAGCAAC TGGAGTGGAA CGCGCAGGGG
CAGCTGACGC GGGTCATCAG CGGCAACACG GAGACGCACT ACGGCTACGA TGCGCTGGGG
AGGCGAATCC GCAAGGCGAC GTACGGGCGG CACACGGGTC ATACGGCGCG GAGCCGGACG
GACTTTGTGT GGGAGGGGTT CAGGCTGTTG CAGGAGAACG TGCAGCAGCA GGGCTGGCGG
ACCTATCTGT ACGATGCGGA ACAGCCGTAC ACGCCGGTGG CGAGCGTGAC GGGAAAGGGA
GAAAGCAGGC AGGTGTGGTA TTACCACACG GATGTGACGG GCACGCCGCA GGAGGTGACG
GCGGCAGATG GAACGCTGGT GTGGGCGGGG TATATCAGGG GGTTTGGAGA GAATGCGGCG
GACATCAGCA ACAGCGGGGC GTACTTTCAC CAGCCGCTGC GGCTGCCGGG GCAGTATTTT
GACGACGAGA CAGGGCTGCA TTACAATCTG TTCAGATATT ATGCACCGGA GTGTGGCAGG
TTCGTCAGTC AGGACCCGAT AGGGTTAAGG GGCGGGTTAA ACCTCTATGC TTATGCGCCT
AATCCGATTA GATGGATCGA TCCTTTAGGA CTTGCTATCC TGGAGCATCA ATCTAATTTT
GATGCGGCAA GGAGAACCGG ATTTGAAAAT GCGGGTATGA CAAACCCTGA GGATGTCACT
TTCTCGAAAG TCGATCCCAA AACTGGTACT GTTGTTGAGT TTAAAGGTCC AAATGGGGCT
AAAGTTGCTT ATGATGCACC TCATGCAGAT ATGGATGTGA CAGCAGGGCA TGATAAACCA
CATGTTGGTT GGCAATCCGC AGGAAAAAGA GGTTCCGGAG GAGCTAATAG AGGTAATATT
ACTTATGATG GCCCACAACA TCCGCATCGC TCTGACTCTA AGGGAGATGA TAAATGTTAA
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| Protein sequence | MYEAARVDDP IYHTSALAGF LIGAIIGIAI IALAAFAFFS CGFLAGLILG FMADQIASGV
LQLGEAIGRS NHHTAGKILT GSENVSTNSR PAARAVLSTV KCDNHIAEKR IAQGSENIYI
NSQPAARKDD HTECDAVIED GSPNVFLGGG TQTVLEISSE IPDWLRKVVD VLFVVASLLG
GLAGAWRQAA KLGTKFGTKC AAKFIGGELV GMAVGEAISG LFSNPVDVTT GQKILLPETD
FTLPGRLPVT CSRFYASHLE TVGLLGRGWR LNWETSLRED DEHITLTGVQ GRELRYPKTM
LTPGHQIFDP EEQLYLSRLH DGRYVLHYTD RSYYVFGDFD SDGMAYLLFM ETPHRQRIVF
GHEGGRLVRI ASSSGHHLLL HRTQTPAGER LSRIELVQGG TRGNLVEYRY DDNGQLTGVV
NRAGTQVRQF AYENGLMTAH SNAAGFTCRY RWQELDGAPR VTEHDTSDGE HYRFDYDFAA
GTTTVTGRQG ESWQWWYDRE TYITAHRTPG GGMYRFTYNE DHFPVNIELP GGRTVAYEYD
IQNRVVKTTD PEGRVTQTQW NGEFDEITRT ALDDDAVWKT QYNAHGQPVQ ETDPEGRVTQ
YAYDEQGQMC SRTDAAGGTV VTAFDSRGQM TRYTDCSGRS TGYDHDEDGN LTRVTDAEGK
VVRISYNRLG LPETVNSPGK QQDRYTWNAL GLMSSHRRIT GSVESWRYTP RGLLAAHTDE
EKRETRWQYT PEGRVAALTN GNGAQYRFSH DADGRLVREV RPDGLSRTFI LDDSGYLTAI
QTTGTQGGVR RETQQRDALG RLLRTENEHC QRTFSYNRLD QITAVTLTPT EAGQQQHRMQ
ADTVRFEYDR SGWLTAEHAG NGSIRYQRDA LGNPTDITLP DGQHLTHLYY GSGHLLQTAL
DGLTVSEYER DSLHRQIMRT QGQLATYSGY DDDGLLSWQR SLAPGSAPVL PGQRPARQGC
VTSRDYYWNN HGEVGTIDDG LRGSVVYSYD RSGYLTGRSG QMYDHDRYYY DKAGNLLDNE
GQGPVMNNRL PGCGRDRYGY NEWGELTTRR DQQLEWNAQG QLTRVISGNT ETHYGYDALG
RRIRKATYGR HTGHTARSRT DFVWEGFRLL QENVQQQGWR TYLYDAEQPY TPVASVTGKG
ESRQVWYYHT DVTGTPQEVT AADGTLVWAG YIRGFGENAA DISNSGAYFH QPLRLPGQYF
DDETGLHYNL FRYYAPECGR FVSQDPIGLR GGLNLYAYAP NPIRWIDPLG LAILEHQSNF
DAARRTGFEN AGMTNPEDVT FSKVDPKTGT VVEFKGPNGA KVAYDAPHAD MDVTAGHDKP
HVGWQSAGKR GSGGANRGNI TYDGPQHPHR SDSKGDDKC
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