| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0300 |
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| Symbol | |
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| ID | 6482930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 316479 |
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| End bp | 317987 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642735733 |
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| Product | EvpB family type VI secretion protein |
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| Protein accession | YP_002039508 |
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| Protein GI | 194442296 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.205878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.104649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACA GTAATATGCA GGCAACCGAC GCGGTTGCTC AGGATACCGT CTCCGCATCC
GGTGAATTTG ATGCGTTGCT GAATCAGGCC TTCCGACCCA AGACTACCCA GGCGGCAAAA
GCCGTGGAAG CCGCGGTGCA GACGCTGGCG CAACAGGCGC TGGCGAACAC GATCACCGTC
AGCGATGACG CCTATAAAAG CATCAGCGCT ATTATTGCGC AGATCGACTT TAAACTGACC
GAACAGATCA AACTGATCCT GCAACATCCC GACTGGCAGA AGCTGGAATC CTCGTGGCGC
GGTATGGAGC ATCTGGTTTA CAACACCGAG ACCGACGAAA AGCTGAAAAT CCGCTTCATG
AATCTGTCAA AAGATGAATT GCGGCGCAAC ATGAAGCGTT ACAAGGGCAT CGCCTGGGAT
CAAAGCCCGA TGTTCAAGAA ACTGTATGAA GCCGAATACG GCCAGTTAGG TGGCGAACCT
TATGGCTGTA TCATTGCGGA TTACTACTTC GACCATACAC CGCCCGATGT GGATCTGCTT
GGCTCTATCG CCAAAGTCGC CGCGTCGGCC CATGCGCCGT TTATTGCCGG GGCTTCCCCC
TCGGTACTGC AAATGGACTC CTGGCAGGAG CTGGCGAATC CCCGCGACCT GACCAAAATC
GTCACCCAGA ACCTGGAATA TGCGCCGTGG AACTCGCTGC GGGCTAGCGA AGACTCCCGT
TATATTGGCC TGACGATGCC GCGTTTTCTT GCCCGCCTGC CGTATGGCGC AAAAACCAAC
CCGGTGGACG AGTTTGATTT TGAAGAAGAT GCGGATGGTT CTGACCATAC TAAATACGTC
TGGAGCAACG CGGCCTACGC GATGGGCGTA AACATCAACC GTTCCTTCAA ACACTACGGC
TGGTGTACGT TGATTCGCGG TGTGGAATCA GGCGGTGCGG TGGAAAATCT TCCCTGCCAT
ACCTTCCCGA CTGACGATGG CGGCGTGGAC ATGAAATGCC CGACCGAAAT TGCCATCTCT
GACCGCCGCG AGGCTGAACT GGCGAAAAAC GGTTTTATCC CGTTGATCCA CCGTAAAAAC
TCAGACTATG CCGCCTTTAT CGGCGCACAA TCGCTGCAAA AACCACAGGA ATACTACGAT
CCGGACGCGA CGGCCAACGC CAACCTGTCC GCCCGTCTGC CGTACCTGTT CGCCTGCTCG
CGCTTCGCTC ACTTCCTCAA ATGTATCGTC CGCGACAAAA TCGGTTCCTT TAAAGAGCGT
GAGGATATGC AGCGCTGGCT AAATGAATGG ATTATGAATT ACGTCGACGC CGATCCGGTG
AACTCCTCGC AAGAAACTAA AGCCCGTCGT CCGCTGGCTG CCGCTGAAGT AGTGGTGGAA
GAGGTGGAAG GCAATCCAGG TTATTACGAC GCGAAATTCT TCCTGCGTCC GCATTTCCAG
CTTGAAGGGC TGACGGGATC GCTGCGCCTG GTGACAAAAC TGCCGTCAGT GAAGCAGGGC
AATGCCTGA
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| Protein sequence | MANSNMQATD AVAQDTVSAS GEFDALLNQA FRPKTTQAAK AVEAAVQTLA QQALANTITV
SDDAYKSISA IIAQIDFKLT EQIKLILQHP DWQKLESSWR GMEHLVYNTE TDEKLKIRFM
NLSKDELRRN MKRYKGIAWD QSPMFKKLYE AEYGQLGGEP YGCIIADYYF DHTPPDVDLL
GSIAKVAASA HAPFIAGASP SVLQMDSWQE LANPRDLTKI VTQNLEYAPW NSLRASEDSR
YIGLTMPRFL ARLPYGAKTN PVDEFDFEED ADGSDHTKYV WSNAAYAMGV NINRSFKHYG
WCTLIRGVES GGAVENLPCH TFPTDDGGVD MKCPTEIAIS DRREAELAKN GFIPLIHRKN
SDYAAFIGAQ SLQKPQEYYD PDATANANLS ARLPYLFACS RFAHFLKCIV RDKIGSFKER
EDMQRWLNEW IMNYVDADPV NSSQETKARR PLAAAEVVVE EVEGNPGYYD AKFFLRPHFQ
LEGLTGSLRL VTKLPSVKQG NA
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