| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0292 |
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| Symbol | |
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| ID | 6486532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 307711 |
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| End bp | 308706 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642735725 |
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| Product | type VI secretion protein |
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| Protein accession | YP_002039500 |
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| Protein GI | 194444207 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0831142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.923003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCG CTCTCGACCA GGCGCAGAAA ACCCCCTGGC GTTACGGATT CCTGAACCTG
ATGCGGCGCG TGGATGCCCA GCTCTGTGAT ACTCCGGCAG GCAGTATCTG GCAGCCACGG
ATGGAAAAAT TCCGTCTGGG ACAGACGCCG ACGATGACCT TTGCGCCACG GGAAATCGCC
CAGGTCAGCT GGCAGGATGG ACGCCTGCAC CTGAGCCTGT ACAGCCTCGG ACTATGGGGG
CCAAACGGCC CGTTGCCGCT GCACTATACC GAGCTGGCAC TGAACCGCTC AGAGAGTCGT
CACGATCCGA CGCTGGTTCA TTTTTCCAAT ATTTTTCACC ACCGCTGGCT GACGCAGTTC
TGGCAGGCAT GGCGCAGCGC CCAGTCCGCT GGTGGCGGGC TGGACAAACC GGAACACGAC
CGTTTTGCGT TTTATATCGC CAGTCTCAGC GGGCAGGATC TACGGGAAAG CGCCGAAAGC
CCGCTGTCAG ATCATGTTCG CCTGGCGGCC TCCGCCCATC TGGTACGCGA ATCGCGCAAT
CCTGACGGGC TGGCCGCCAC GCTGGCGCAC TATTTCAGCG TACCTTTTGC GGTGAAAGAG
TTCGCCCTGC ACTGGATAAC GGTGGCGAAC GATGAAATCA CCCGTCTGGG CACGCCCGCG
CAGTCTTCGG TGCTGGGCAA CGGGGCGCTT ATCGGCCAGG CCGTACCGGA TATGCAGTAC
AAATTCCGGC TAATTATCGG CCCGCTCACG CTGGAGGATT ACCTGCGTTT TCTGCCCGGC
GGCAACAATC TGCCCGTGCT GACAGAACTG GTGCGTACGT TCATTGGTTT TGAATATTGC
TGGGAAATTG AGCTGCAGTT GAAGCCTCAT GCCGCACCGC CTGCGGTGAT CGGCGGTGCG
CAGCGGCTTG GCTGGACGGC CTGGGCAGGT AAAGCCATGC ATGACCGTCC GGTGACCGGC
ATGATTTTTG AACCTGAACA CGGCTTAACC CACTGA
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| Protein sequence | MTGALDQAQK TPWRYGFLNL MRRVDAQLCD TPAGSIWQPR MEKFRLGQTP TMTFAPREIA
QVSWQDGRLH LSLYSLGLWG PNGPLPLHYT ELALNRSESR HDPTLVHFSN IFHHRWLTQF
WQAWRSAQSA GGGLDKPEHD RFAFYIASLS GQDLRESAES PLSDHVRLAA SAHLVRESRN
PDGLAATLAH YFSVPFAVKE FALHWITVAN DEITRLGTPA QSSVLGNGAL IGQAVPDMQY
KFRLIIGPLT LEDYLRFLPG GNNLPVLTEL VRTFIGFEYC WEIELQLKPH AAPPAVIGGA
QRLGWTAWAG KAMHDRPVTG MIFEPEHGLT H
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