| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0234 |
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| Symbol | dapD |
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| ID | 6485940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 251448 |
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| End bp | 252272 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642735671 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_002039453 |
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| Protein GI | 194446468 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGT TACAGAACGT TATTGAGACC GCTTTTGAGC GCCGCGCCGA TATTACGCCG
GCTAATGTAG ATACCGTGAC CCGAGAGGCG GTAAAACAGG TCATTTCTCT ACTTGATTCC
GGCGCGCTGC GTGTCGCAGA AAAAATCGAC GGTCAGTGGG TCACTCACCA GTGGTTGAAG
AAAGCGGTTC TGCTCTCTTT CCGTATTAAC GATAACCAGG TTATCGACGG TGCGGAAAGC
CGCTACTTCG ATAAAGTCCC GATGAAATTC GCTGATTACG ACGAAGCGCG TTTTCAGAAA
GAAGGCTTCC GCGTCGTTCC GCCTGCGGCC GTTCGTCAGG GCGCATTTAT CGCCCGCAAC
ACCGTGCTGA TGCCGTCTTA CGTTAACATC GGCGCCTACG TTGACGAAGG CACCATGGTT
GACACCTGGG CGACGGTGGG TTCCTGTGCG CAGATTGGTA AAAATGTTCA CCTTTCCGGC
GGCGTGGGTA TCGGCGGCGT ACTGGAGCCG CTGCAGGCTA ACCCGACCAT CATTGAAGAC
AACTGCTTTA TTGGCGCGCG TTCTGAAGTC GTGGAAGGCG TCATTGTCGA AGAAGGTTCC
GTCATTTCCA TGGGCGTATA CCTCGGCCAG AGCACCAAAA TCTACGATCG CGAAACCGGT
GAAGTTCACT ATGGCCGCGT ACCGGCGGGC TCCGTGGTCG TTTCCGGCAA CCTGCCGTCA
AAAGACGGTA AGTACAGTTT GTACTGCGCG GTGATCGTGA AAAAAGTCGA CGCCAAAACG
CGTGGTAAAG TGGGCATTAA CGAATTATTG CGCACTATTG ATTAA
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| Protein sequence | MQQLQNVIET AFERRADITP ANVDTVTREA VKQVISLLDS GALRVAEKID GQWVTHQWLK
KAVLLSFRIN DNQVIDGAES RYFDKVPMKF ADYDEARFQK EGFRVVPPAA VRQGAFIARN
TVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED
NCFIGARSEV VEGVIVEEGS VISMGVYLGQ STKIYDRETG EVHYGRVPAG SVVVSGNLPS
KDGKYSLYCA VIVKKVDAKT RGKVGINELL RTID
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