Gene SNSL254_A0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0228 
SymbolmtnN 
ID6486884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp244221 
End bp244919 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content57% 
IMG OID642735665 
Product5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 
Protein accessionYP_002039447 
Protein GI194445000 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
[TIGR01705] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.819967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG GCATCATTGG CGCAATGGAA GAAGAAGTTA CGCTGCTGCG TGACAAAATT 
GACAACCGTC AGACGATTAC GCTGGGCGGC TGCGAAATTT ACACTGGCCA GTTGAACGGC
ACCGAAGTGG CGTTGCTGAA ATCCGGTATC GGTAAAGTCG CGGCGGCGCT GGGCGCAACG
TTGCTTCTGG AGCACTGCAA GCCGGACGTG ATCATCAATA CCGGTTCCGC AGGCGGTCTG
GCGTCCACGC TGAAGGTCGG CGATATCGTC GTCTCTGACG AAGCGCGTTA CCACGACGCT
GATGTGACCG CTTTCGGCTA TGAATACGGG CAATTACCGG GCTGTCCGGC CGGATTTAAG
GCCGATGACA AACTGATTGC CGCCGCGGAA TCCTGCATCA GGGAGTTGAA TCTGAACGCG
GTACGCGGCC TTATTGTTAG CGGCGACGCG TTTATTAACG GCTCCGTCGG GCTGGCGAAA
ATTCGGCATA ACTTCCCCGA CGCGGTCGCC GTAGAGATGG AAGCCACCGC TATCGCCCAC
GTCTGCTATA ACTTCAGCGT GCCGTTCGTG GTGGTACGCG CTATTTCTGA CGTGGCCGAT
CAGCAATCGC ACCTCAGCTT TGACGAATTC CTCGCGGTGG CGGCGAAACA GTCGACTCTG
ATGGTCGAAA CGCTGGTACA GAAACTGGCG CATGGCTAA
 
Protein sequence
MKIGIIGAME EEVTLLRDKI DNRQTITLGG CEIYTGQLNG TEVALLKSGI GKVAAALGAT 
LLLEHCKPDV IINTGSAGGL ASTLKVGDIV VSDEARYHDA DVTAFGYEYG QLPGCPAGFK
ADDKLIAAAE SCIRELNLNA VRGLIVSGDA FINGSVGLAK IRHNFPDAVA VEMEATAIAH
VCYNFSVPFV VVRAISDVAD QQSHLSFDEF LAVAAKQSTL MVETLVQKLA HG