Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0224 |
Symbol | |
ID | 6484504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 240820 |
End bp | 242241 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642735661 |
Product | chloride channel protein |
Protein accession | YP_002039443 |
Protein GI | 194442592 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.154288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.638237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAG ACACTTCCAC CTTTTTAGCT CAGCAAATTG TGCGTTTACG GCGCAGAGAT CAGATTCGCC GGTTAATGCA GCGGGATAAA ACGCCGCTGG CCATCCTGTT AATGGCGGCC GTTGTCGGCA CGCTTACCGG ACTGGTTGGC GTCGCCTTTG AAAAGGCGGT TTCCTGGGTA CAAAACATGC GCATTGGCGC GCTGGTTCAG GTCGCGGACC ATGCGTTTTT GCTTTGGCCG CTGGCCTTTA TCCTTTCGGC GTTACTGGCG ATGGTCGGCT ACTTTTTGGT GCGAAAATTT GCGCCGGAAG CCGGCGGCTC GGGTATCCCG GAAATTGAAG GCGCGCTGGA GGAGTTACGT CCGGTGCGCT GGTGGCGCGT GTTGCCGGTG AAGTTTATCG GCGGGATGGG AACGTTGGGC GCAGGAATGG TATTAGGGCG CGAAGGGCCA ACGGTGCAAA TCGGGGGCAA CCTGGGGCGC ATGGTGCTGG ATGTTTTTCG TATGCGCAGC GCCGAAGCGC GGCATACGTT GCTGGCGACC GGCGCGGCGG CGGGGCTCTC TGCGGCGTTT AACGCGCCGC TGGCGGGTAT CCTGTTTATT ATTGAAGAGA TGCGCCCGCA GTTTCGCTAC AACCTGATTT CGATTAAAGC GGTGTTTACC GGCGTCATCA TGTCGAGCAT TGTGTTCCGC ATATTTAACG GCGAAGCGCC GATTATTGAA GTCGGCAAAC TGTCTGATGC GCCGGTTAAC ACGCTGTGGT TATACCTTAT CCTCGGCATT ATTTTTGGCT GCGTCGGGCC AGTATTTAAT TCGTTGGTGC TGCGTACCCA GGATATGTTT CAGCGCTTTC ATGGCGGCGA AATTAAAAAA TGGGTGCTTA TGGGCGGCGC GATCGGCGGC CTGTGCGGTA TTCTGGGGTT GATTGAGCCG GAAGCGGCAG GCGGCGGATT TAACCTTATT CCTATCGCCG CGGCAGGTAA TTTTAGCGTC GGGCTACTGC TGTTCATCTT TATTACCCGG GTGGTCACAA CGCTGCTTTG CTTTTCTTCC GGCGCGCCGG GGGGCATTTT CGCCCCGATG CTGGCGCTGG GAACGCTGCT TGGTACGGCC TTCGGTATGG CGGCGGCAGT GCTTTTCCCG CAGTATCACC TGGAGGCCGG TACCTTTGCG ATTGCCGGGA TGGGGGCGCT GATGGCGGCG TCGGTGCGCG CCCCGCTGAC GGGGATTGTG CTGGTGCTGG AGATGACCGA TAACTACCAG CTCATTTTGC CAATGATTAT CACCTGTCTT GGCGCGACAC TATTAGCCCA GTTTTTGGGC GGGAAACCGT TATACTCAAC CATCCTGGCG CGCACTCTGG CGAAGCAGGA TGCGGAACAG GCGGCGAAAA ACCAGAATGC GCCTGCGGGC GAGAATACTT GA
|
Protein sequence | MKTDTSTFLA QQIVRLRRRD QIRRLMQRDK TPLAILLMAA VVGTLTGLVG VAFEKAVSWV QNMRIGALVQ VADHAFLLWP LAFILSALLA MVGYFLVRKF APEAGGSGIP EIEGALEELR PVRWWRVLPV KFIGGMGTLG AGMVLGREGP TVQIGGNLGR MVLDVFRMRS AEARHTLLAT GAAAGLSAAF NAPLAGILFI IEEMRPQFRY NLISIKAVFT GVIMSSIVFR IFNGEAPIIE VGKLSDAPVN TLWLYLILGI IFGCVGPVFN SLVLRTQDMF QRFHGGEIKK WVLMGGAIGG LCGILGLIEP EAAGGGFNLI PIAAAGNFSV GLLLFIFITR VVTTLLCFSS GAPGGIFAPM LALGTLLGTA FGMAAAVLFP QYHLEAGTFA IAGMGALMAA SVRAPLTGIV LVLEMTDNYQ LILPMIITCL GATLLAQFLG GKPLYSTILA RTLAKQDAEQ AAKNQNAPAG ENT
|
| |