Gene SNSL254_A0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0224 
Symbol 
ID6484504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp240820 
End bp242241 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content57% 
IMG OID642735661 
Productchloride channel protein 
Protein accessionYP_002039443 
Protein GI194442592 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.154288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.638237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAG ACACTTCCAC CTTTTTAGCT CAGCAAATTG TGCGTTTACG GCGCAGAGAT 
CAGATTCGCC GGTTAATGCA GCGGGATAAA ACGCCGCTGG CCATCCTGTT AATGGCGGCC
GTTGTCGGCA CGCTTACCGG ACTGGTTGGC GTCGCCTTTG AAAAGGCGGT TTCCTGGGTA
CAAAACATGC GCATTGGCGC GCTGGTTCAG GTCGCGGACC ATGCGTTTTT GCTTTGGCCG
CTGGCCTTTA TCCTTTCGGC GTTACTGGCG ATGGTCGGCT ACTTTTTGGT GCGAAAATTT
GCGCCGGAAG CCGGCGGCTC GGGTATCCCG GAAATTGAAG GCGCGCTGGA GGAGTTACGT
CCGGTGCGCT GGTGGCGCGT GTTGCCGGTG AAGTTTATCG GCGGGATGGG AACGTTGGGC
GCAGGAATGG TATTAGGGCG CGAAGGGCCA ACGGTGCAAA TCGGGGGCAA CCTGGGGCGC
ATGGTGCTGG ATGTTTTTCG TATGCGCAGC GCCGAAGCGC GGCATACGTT GCTGGCGACC
GGCGCGGCGG CGGGGCTCTC TGCGGCGTTT AACGCGCCGC TGGCGGGTAT CCTGTTTATT
ATTGAAGAGA TGCGCCCGCA GTTTCGCTAC AACCTGATTT CGATTAAAGC GGTGTTTACC
GGCGTCATCA TGTCGAGCAT TGTGTTCCGC ATATTTAACG GCGAAGCGCC GATTATTGAA
GTCGGCAAAC TGTCTGATGC GCCGGTTAAC ACGCTGTGGT TATACCTTAT CCTCGGCATT
ATTTTTGGCT GCGTCGGGCC AGTATTTAAT TCGTTGGTGC TGCGTACCCA GGATATGTTT
CAGCGCTTTC ATGGCGGCGA AATTAAAAAA TGGGTGCTTA TGGGCGGCGC GATCGGCGGC
CTGTGCGGTA TTCTGGGGTT GATTGAGCCG GAAGCGGCAG GCGGCGGATT TAACCTTATT
CCTATCGCCG CGGCAGGTAA TTTTAGCGTC GGGCTACTGC TGTTCATCTT TATTACCCGG
GTGGTCACAA CGCTGCTTTG CTTTTCTTCC GGCGCGCCGG GGGGCATTTT CGCCCCGATG
CTGGCGCTGG GAACGCTGCT TGGTACGGCC TTCGGTATGG CGGCGGCAGT GCTTTTCCCG
CAGTATCACC TGGAGGCCGG TACCTTTGCG ATTGCCGGGA TGGGGGCGCT GATGGCGGCG
TCGGTGCGCG CCCCGCTGAC GGGGATTGTG CTGGTGCTGG AGATGACCGA TAACTACCAG
CTCATTTTGC CAATGATTAT CACCTGTCTT GGCGCGACAC TATTAGCCCA GTTTTTGGGC
GGGAAACCGT TATACTCAAC CATCCTGGCG CGCACTCTGG CGAAGCAGGA TGCGGAACAG
GCGGCGAAAA ACCAGAATGC GCCTGCGGGC GAGAATACTT GA
 
Protein sequence
MKTDTSTFLA QQIVRLRRRD QIRRLMQRDK TPLAILLMAA VVGTLTGLVG VAFEKAVSWV 
QNMRIGALVQ VADHAFLLWP LAFILSALLA MVGYFLVRKF APEAGGSGIP EIEGALEELR
PVRWWRVLPV KFIGGMGTLG AGMVLGREGP TVQIGGNLGR MVLDVFRMRS AEARHTLLAT
GAAAGLSAAF NAPLAGILFI IEEMRPQFRY NLISIKAVFT GVIMSSIVFR IFNGEAPIIE
VGKLSDAPVN TLWLYLILGI IFGCVGPVFN SLVLRTQDMF QRFHGGEIKK WVLMGGAIGG
LCGILGLIEP EAAGGGFNLI PIAAAGNFSV GLLLFIFITR VVTTLLCFSS GAPGGIFAPM
LALGTLLGTA FGMAAAVLFP QYHLEAGTFA IAGMGALMAA SVRAPLTGIV LVLEMTDNYQ
LILPMIITCL GATLLAQFLG GKPLYSTILA RTLAKQDAEQ AAKNQNAPAG ENT