Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0212 |
Symbol | |
ID | 6485304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 229812 |
End bp | 231869 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642735649 |
Product | iron-hydroxamate transporter permease subunit |
Protein accession | YP_002039431 |
Protein GI | 194444741 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.800681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.940729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAGAA AACGTGAAAT GCCGGATGGC GGCGCGAAAA GCGCCTTATC CGACCTACGG TTTGGGCGCT TTGTAGGCCG GATAAGGCGA AGCCGCCATC CGGCGTTGCT GTTATTGGCG CTGTTTGTTG CCGCCTGCTG GCTGACATGG GTTAACTTCT CCGTTGCGCT ACCGCGCAGC CAGTGGCAAC AGGCTATCTG GTCACCGGAT ATCGACATCA TTGAGCAGAT GATTTTTCAT TACAGCCTGC TGCCAAGACT GGCGATTTCG CTACTGGTGG GCGCGGGACT TGGGCTGGTA GGCGTCCTGT TCCAGCAAGT ATTACGTAAC CCGCTGGCGG AACCGACCAC GCTGGGTGTG GCGACCGGCG CGCAATTGGG GATCACGGTG ACTACGCTTT GGACGATTCC CGGCGCGCTG GCCACGCAGT TTGCCGCCCT GACGGGAGCC TGCATTGTCG GCGCGCTGGT GTTCGGTGTG GCGTGGGGCA AACGCCTGTC GCCAGTGACC CTGATCCTCG CCGGGCTGGT GGTCAGCCTC TATTGTGGCG CAATCAACCA GTTACTGGTG ATTTTCCACC ACGATCAGTT GCAAAGCATG TTTTTATGGA GCACCGGAAC GCTAACGCAA ACCGACTGGA GCGGCGTGCA GCGTCTGTGG CCGCAGTTGC TGGGCGGCGT GATGCTCACG TTATTGTTGT TACGTCCGAT GACGCTGATG GGGCTGGATG ACGGCGTTGC GCGTAATCTG GGTCTGGCGC TGTCGTTAGC GCGTCTGGCG GCGCTGTCGC TGGCGATTGT GTTGAGCGCT CTGCTGGTCA ACGCGGTGGG CATTATCGGT TTTATCGGCC TGTTTGCGCC GCTGCTGGCG AAAATGCTTG GCGCAAGACG TCTGCTGGCG CGCCTGATGC TGGCGCCGCT CATTGGGGCG CTTATTTTGT GGCTATCCGA TCAGATTATC CTTTGGCTAA CCCGCGTATG GATGGAGGTT TCCACCGGGT CAGTGACGGC GTTAATCGGC GCGCCGCTGC TCCTGTGGCT GCTGCCGCGG CTTAAAAGCA TGAGCGCGCC GGATATGAAC GCCAGCGATC GTGTGGCAGC GGAACGTCGG CACGTTCTTG CTTTTGCCGT TGCCGGTGGC GCGCTCCTGC TGCTGGCAAC ATGGGTCGCC CTCTCTTTTG GTCGCGACGC GCACGGCTGG ACGTGGGCGA GCGGAACGCT GCTTGAAGAA CTGATGCCGT GGCGCTGGCC GCGGATACTG GCGGCGTTAA TGGCGGGCGT CATGCTGGCG GTGGCGGGCT GCATTATTCA GCGTCTGACC GGTAATCCAA TGGCCAGCCC GGAAGTGCTG GGGATCAGTT CCGGAGCCGC GTTTGGCGTG GTGTTGATGC TGTTTTTGGT GCCGGGGAAT GCTTTCGGTT GGCTACTGCC TGCCGGAAGC CTGGGTGCGG CGGCGACACT GCTGATTATT ATGATAGCCG CCGGGCGCGG CGGTTTCTCA CCGCAACGGA TGTTGCTGGC GGGGATGGCG CTCAGCACCG CGTTTACCAT GCTGCTAATG ATGCTCCAGG CGAGCGGCGA TCCGCGGATG GCGGAAGTAT TGACCTGGAT CGCAGGATCT ACCTATAACG CCACTGACGG GCAGGTTACG CGAACCGCGA TCGTAATGGT GATTTTGCTG GCACTTGTGC CGTTGTGTCG CCGCTGGTTA ACGATTTTGC CCCTGGGCGG CGATGCCGCG CGCGCGGTGG GCATGGCGCT TACGCCGTCG CGTATCGCGC TGCTGGCGCT GGCGGCTTGT TTGACGGCAA CCGCGACGAT GACCATTGGG CCGCTGAGTT TCGTTGGACT GATGGCGCCG CATATTGCGC GGATGCTCGG TTTTCGCCGG ACGATGCCGC ATATGGTCAT CTCGGCGCTG GCAGGGGGCG TTTTACTGGT CTTTGCCGAC TGGTGCGGCA GGATGGCGCT ATTTCCGTAT CAGATCCCGG CGGGACTGCT TTCAAGCTTT ATTGGCGCGC CGTATTTTAT CTATTTGCTA CGTAAACAGA GCCAGTAA
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Protein sequence | MSRKREMPDG GAKSALSDLR FGRFVGRIRR SRHPALLLLA LFVAACWLTW VNFSVALPRS QWQQAIWSPD IDIIEQMIFH YSLLPRLAIS LLVGAGLGLV GVLFQQVLRN PLAEPTTLGV ATGAQLGITV TTLWTIPGAL ATQFAALTGA CIVGALVFGV AWGKRLSPVT LILAGLVVSL YCGAINQLLV IFHHDQLQSM FLWSTGTLTQ TDWSGVQRLW PQLLGGVMLT LLLLRPMTLM GLDDGVARNL GLALSLARLA ALSLAIVLSA LLVNAVGIIG FIGLFAPLLA KMLGARRLLA RLMLAPLIGA LILWLSDQII LWLTRVWMEV STGSVTALIG APLLLWLLPR LKSMSAPDMN ASDRVAAERR HVLAFAVAGG ALLLLATWVA LSFGRDAHGW TWASGTLLEE LMPWRWPRIL AALMAGVMLA VAGCIIQRLT GNPMASPEVL GISSGAAFGV VLMLFLVPGN AFGWLLPAGS LGAAATLLII MIAAGRGGFS PQRMLLAGMA LSTAFTMLLM MLQASGDPRM AEVLTWIAGS TYNATDGQVT RTAIVMVILL ALVPLCRRWL TILPLGGDAA RAVGMALTPS RIALLALAAC LTATATMTIG PLSFVGLMAP HIARMLGFRR TMPHMVISAL AGGVLLVFAD WCGRMALFPY QIPAGLLSSF IGAPYFIYLL RKQSQ
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