Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0198 |
Symbol | panC |
ID | 6482220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 213657 |
End bp | 214511 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642735635 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_002039417 |
Protein GI | 194442904 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.518661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTAATCA TTGAAACCCT GCCGCTGCTG CGCCAGCATA TTCGTCGTCT GCGTCAGGAA GGTAAACGCG TCGCACTGGT TCCCACCATG GGCAACCTGC ACGACGGCCA TATGAAGCTG GTCGATGAGG CAAAAGCCCG GGCTGATGTG GTGATCGTCA GCATTTTCGT CAATCCGATG CAGTTTGATC GGCCGGACGA TCTGGTGCGT TATCCGCGCA CGCTGCAGGA AGATTGTGAA AAGCTGAACA AACGCAAAGT CGATTATGTC TTTGCGCCAG CCGTTGAGGA AATCTACCCG CATGGGCTGG AAGGCCAGAC GTACGTTGAT GTTCCCGGCC TCTCTACCAT GCTGGAAGGC GCCAGCCGTC CAGGTCATTT CCGCGGCGTC TCGACTATCG TCAGCAAGCT GTTCAACCTG ATCCAGCCGG ATATCGCCTG CTTTGGCGAG AAGGATTTCC AGCAACTGGC GCTGATCCGC AAAATGGTGG CGGATATGAG TTATGACATT GAGATCGTCG GCGTGCCGAT TATTCGCGCT AAAGACGGTC TGGCGCTCAG CTCACGTAAC GCTTATCTGA CCGCAGAGCA GCGCAAAATT GCGCCGGGTC TATACAACGT GATGAATCGC ATCGCTGAAA AACTGATTGC GGGTAATCGT GAGCTGCAAG AGATTATTGC CATTGCCGAA CAGGAACTGA ATGAAAAAGG CTTCCGTGCC GACGACATTC AAATCCGTGA TGCCGACACG CTGCTGGAGC TGACGGAAAC CAGCAAACGC GCAGTGATTC TGGCTGCCGC CTGGCTGGGT CAGGCGCGTC TGATCGATAA TCAAAGCGTT ACATTAGCCC AGTAG
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Protein sequence | MLIIETLPLL RQHIRRLRQE GKRVALVPTM GNLHDGHMKL VDEAKARADV VIVSIFVNPM QFDRPDDLVR YPRTLQEDCE KLNKRKVDYV FAPAVEEIYP HGLEGQTYVD VPGLSTMLEG ASRPGHFRGV STIVSKLFNL IQPDIACFGE KDFQQLALIR KMVADMSYDI EIVGVPIIRA KDGLALSSRN AYLTAEQRKI APGLYNVMNR IAEKLIAGNR ELQEIIAIAE QELNEKGFRA DDIQIRDADT LLELTETSKR AVILAAAWLG QARLIDNQSV TLAQ
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