Gene SNSL254_A0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0161 
Symbol 
ID6485342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp172641 
End bp173591 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content53% 
IMG OID642735598 
Productalpha-N-arabinofuranosidase 2 
Protein accessionYP_002039380 
Protein GI194444745 
COG category[R] General function prediction only 
COG ID[COG3940] Predicted beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones94 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACT GGCCAAACCC GTTTATTGAA CAACGTGCCG ATCCATTTAT TTTACGCGAC 
GGCAGCGATT ACTACTTTAT TGCCTCCGTA CCGGAATATG ACAGACTGGA AATCCGCCGG
GCTAATTCGC TGGAAGGGTT GCGCGCCGCC GACCCCGTTG TCGTCTGGCG CAAACCGAAA
ACAGGCCCGA TGAGCCAGCT TATCTGGGCA CCGGAAATGC ACCGCATCAA CGGTAAGTGG
TACATCTATT TTGCCGCTAC CCATACTCAA GCGCTTGATA AGCTGGGAAT GTTCCAGCAC
CGCATGTTTG CCCTGGAGTG CGCCGATGCC GACCCACTCA CCGGCAAGTG GACGGAGAAA
GGTCAAATTA AAACACCGTT TGATACCTTC GCCCTCGATG CCACCACTTT TTATCATCAG
GGAAAGCAGT GGTATCTGTG GGCGCAAAAA GCGCCGGATA TTGCCGGTAA CTCAAATATT
TATCTGGCTG AACTGGAAAA TCCGTGGACG ATTAAAGGCG AGCCGGTAAG ACTCAGTAAG
CCAGAGTACG ACTGGGAGTG TCGGGGTTTT TGGGTTAACG AAGGTCCGGC CGTCGTGGTG
CATGGCGACA AGCTCTTTAT CAGCTATTCG GCCAGCGCCA CCGATGAAAA CTACTGTATG
GGATTACTGT GGATTAACGT AAACGACGAT CCGCGCGATC CGGCCAACTG GCATAAATCA
CCGCGCCCGG TCTTTACCAC CAGCTATGAA AATCGCCAGT ATGGGCCGGG ACATAACAGC
TTTACGCAAA CGCCGGAAGG TGAAGATGTA CTGGTGTACC ACGCGAGAAA TTACACCGAA
ATTGAAGGCG ATCCGTTGTA CGATCCCAAC CGCCATACGC GTCTGAAACG GGTGCGCTGG
GACGAAAACG GGATGCCTGA TTTTGGCGTG CCGCCAGCCG ATACGATCTA A
 
Protein sequence
MANWPNPFIE QRADPFILRD GSDYYFIASV PEYDRLEIRR ANSLEGLRAA DPVVVWRKPK 
TGPMSQLIWA PEMHRINGKW YIYFAATHTQ ALDKLGMFQH RMFALECADA DPLTGKWTEK
GQIKTPFDTF ALDATTFYHQ GKQWYLWAQK APDIAGNSNI YLAELENPWT IKGEPVRLSK
PEYDWECRGF WVNEGPAVVV HGDKLFISYS ASATDENYCM GLLWINVNDD PRDPANWHKS
PRPVFTTSYE NRQYGPGHNS FTQTPEGEDV LVYHARNYTE IEGDPLYDPN RHTRLKRVRW
DENGMPDFGV PPADTI