Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0138 |
Symbol | murD |
ID | 6482939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 149182 |
End bp | 150498 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642735576 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_002039358 |
Protein GI | 194442341 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.794509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT ACCAGGACAA AAACGTCGTC ATTATTGGTC TGGGCTTAAC CGGACTCTCT TGCGTGGACT TTTTTCTCGC CCGCGGCGTG ACGCCGCGGG TGATGGATAC TCGCGTGACG CCGCCGGGTC TGGATAAGCT GCCGCAAGAG GTTGAGCGTC ACGTTGGCGG CCTGAACGAC GAGTGGCTCT TAGCGGCGGA TTTAATCGTT GCCAGCCCTG GTATTGCTCT GGCACACCCT TCGCTGAGCG CTGCCGCCAG CGCTGGAGTA GAAATTGTCG GCGATATCGA ACTGTTTTGC CGCGAAGCGC AGGCGCCGAT TGTAGCCATC ACTGGCTCGA ACGGCAAAAG CACCGTGACC ACCTTAGTGG GCGAGATGGC GAAAGCGGCG GGCGTCAATG TCGGCGTTGG CGGCAATATC GGTCTTCCGG CGCTGATGCT GCTGGATGCC GATCGCGAAT TGTACGTGCT GGAATTATCC AGTTTCCAAC TGGAAACTAC CTCAAGTTTG CAAGCGGCGG CGGCAACGGT GCTCAACGTC ACTGAAGATC ATATGGACCG GTATCCGTTT GGTTTGCAAC AGTACCGGGC GGCGAAACTG CGCGTCTACG AGAAGGCGAA AGTGTGCGTA GTGAATGCCG ATGACGCGTT GACGATGCCG GTACGCGGGG CCGATGAGCG CTGCGTCAGC TTTGGCGTCA ATATGGGTGA TTATCACCTT AATCGTCAGC AGGGCGAAAC CTGGCTGCGA GTCAAAGGCG AGAAGGTGCT GAACGTGAAA GAGATGAAGC TTTCCGGTCA GCATAATTAT ACCAATGCGT TAGCGGCGCT GGCGCTGGCG GATGCCGTAG GTCTGCCGCG CGCCAGCAGT TTGAAGGCGT TGACGACATT TACCGGTCTG GCGCATCGCT TCCAGCTGGC GTTGGAGCAT AACGGCGTAC GTTGGATCAA TGACTCGAAA GCGACCAACG TCGGCAGTAC CGAAGCGGCG CTAAACGGTT TGCATGTGGA CGGTACGCTG CATCTGCTGC TGGGCGGCGA CGGTAAGTCG GCAGACTTTT CTCCGCTGGC GCGCTATCTG ACCGGCGATC GTATCCGCCT GTATTGCTTT GGGCGCGATG GCGCGCAGCT TGCCGCACTG CGTCCGGAAA TCGCCCAACA GACTGAGACG ATGGAAGAGG CGATGCGTTT GCTGGCGCCG CGCGTTCAGC CGGGTGATAT GGTGCTGTTG TCGCCCGCCT GCGCCAGCCT CGATCAGTTT AAAAATTTTG AGCAACGGGG CGATGTCTTT ACCCGTCTGG CGAAGGAGTT AGGTTGA
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Protein sequence | MADYQDKNVV IIGLGLTGLS CVDFFLARGV TPRVMDTRVT PPGLDKLPQE VERHVGGLND EWLLAADLIV ASPGIALAHP SLSAAASAGV EIVGDIELFC REAQAPIVAI TGSNGKSTVT TLVGEMAKAA GVNVGVGGNI GLPALMLLDA DRELYVLELS SFQLETTSSL QAAAATVLNV TEDHMDRYPF GLQQYRAAKL RVYEKAKVCV VNADDALTMP VRGADERCVS FGVNMGDYHL NRQQGETWLR VKGEKVLNVK EMKLSGQHNY TNALAALALA DAVGLPRASS LKALTTFTGL AHRFQLALEH NGVRWINDSK ATNVGSTEAA LNGLHVDGTL HLLLGGDGKS ADFSPLARYL TGDRIRLYCF GRDGAQLAAL RPEIAQQTET MEEAMRLLAP RVQPGDMVLL SPACASLDQF KNFEQRGDVF TRLAKELG
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