Gene SNSL254_A0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0136 
SymbolmurF 
ID6483485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp146745 
End bp148103 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content56% 
IMG OID642735574 
ProductUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 
Protein accessionYP_002039356 
Protein GI194444164 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGCG TAACGCTCAG CAAAATTGCC GATGTCCTTG GCGCCGAACA CCGCGGGGCG 
GATCTCACGC TCGATACGGT CATTACCGAC ACACGGAAAG TGACGCCGGG ATGCCTGTTC
GTGGCGCTGA AAGGGGAACG TTTTGATGCG CATGATTTTG CCGATAAAGC AAAAGCGAAC
GGCGCTGGCG CCCTGCTGGT CAGTCGTCCT CTGGATATCG ATCTTCCGCA GGTGATTGTA
AAAGACACGC GTCAGGCATT TGGCCAACTG GCCGCCTGGG TACGTATGCA GGTACCGGCG
CGGGTGGTGG CGTTAACCGG TTCGTCCGGC AAAACCTCGG TCAAAGAGAT GACCGCCGCG
ATTCTTAGCC AGTGCGGAAA TACTCTGTAT ACCGCAGGCA ATTTTAACAA CGACATCGGC
GTGCCGATAA CGCTGCTGCG CTTAAACCAT GATTATGACT ATGCGGTAAT CGAGTTAGGC
GCTAATCACC AGGGAGAAAT CGCCTGGACC GTTAGCCTGA CGCGCCCGGA AGCGGCGCTG
GTCAATAACC TGGCGGCGGC GCATCTGGAA GGTTTCGGCT CGCTGGCCGG CGTGGCGAAA
GCGAAAGGCG AAATCTATAC CGGTTTGCCT GAGAACGGTA TCGCGATTAT GAATGCCGAT
AATAATGACT GGCTGAACTG GCAAAGCATT ATTGGCGATC GTCAGGTGTG GCGCTTTTCG
CCGAATGCGG CAAACAGCGA CTTTACCGCT GCGAATATCC ACGTGACGTC ACACGGTACC
GAATTTACCC TGCAAACGCC GATGGGCAGC ATTGATGTGC TGCTGCCGTT GCCGGGGCGG
CACAATATTG CCAACGCGCT GGCGGCCGCT GCTTTATCAA TGGCGGTGGG GGCGACGCTG
GCGGCGGTTA AAGCAGGGCT GGCGGCGTTA AAAGCCGTAC CCGGGCGTCT GTTCCCGATT
CAACTAAGTG AAAACCAACT GGTACTGGAT GACGCTTATA ACGCCAACGT CGGTTCGATG
ACCGCCGCAG TGCAGGTCCT TTCTGAAATG CCCGGCTACC GTGTGCTGGT GGTAGGCGAT
ATGGCCGAGT TGGGCGCAGA AAGCGAAGCG TGCCACATCC AGGTTGGCGA GGCCGCAAAA
GCGGCGGGTA TTGATCGCGT GTTAAGCACC GGAAAACTCA GTCAGGCTAT CAGCCACGCC
AGCGGCGTCG GCGAACATTT TGCCGATAAA GCCGCGCTCA TTGCGCGTTT ACACGCTCTG
CTTCAGGAGC AACCAATGAT GACTATTTTA GTGAAAGGAT CACGCAGCGC CGCGATGGAA
GATGTGGTTC ATGCGTTACA GGAGAAAGGT TCATGTTAG
 
Protein sequence
MISVTLSKIA DVLGAEHRGA DLTLDTVITD TRKVTPGCLF VALKGERFDA HDFADKAKAN 
GAGALLVSRP LDIDLPQVIV KDTRQAFGQL AAWVRMQVPA RVVALTGSSG KTSVKEMTAA
ILSQCGNTLY TAGNFNNDIG VPITLLRLNH DYDYAVIELG ANHQGEIAWT VSLTRPEAAL
VNNLAAAHLE GFGSLAGVAK AKGEIYTGLP ENGIAIMNAD NNDWLNWQSI IGDRQVWRFS
PNAANSDFTA ANIHVTSHGT EFTLQTPMGS IDVLLPLPGR HNIANALAAA ALSMAVGATL
AAVKAGLAAL KAVPGRLFPI QLSENQLVLD DAYNANVGSM TAAVQVLSEM PGYRVLVVGD
MAELGAESEA CHIQVGEAAK AAGIDRVLST GKLSQAISHA SGVGEHFADK AALIARLHAL
LQEQPMMTIL VKGSRSAAME DVVHALQEKG SC