Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0113 |
Symbol | thiQ |
ID | 6484607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 125194 |
End bp | 125901 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642735555 |
Product | thiamine transporter ATP-binding subunit |
Protein accession | YP_002039337 |
Protein GI | 194444261 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3840] ABC-type thiamine transport system, ATPase component |
TIGRFAM ID | [TIGR01277] thiamine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.42965 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAAC TGATTGATAT CACCTGGCTT TACCATCATT TGCCGATGCG TTTTACGCTG GCGGTAGAAC GCGGCGAGCA GGTGGCGATT CTTGGCCCCA GCGGCGCGGG GAAAAGCACG TTGTTGAATT TAATTGCCGG TTTTCTTGCG CCTGCCAGCG GTACGTTACT GATTGCCGGT GAAGATCATA CGCTTACGCC GCCCTCACGC CGTCCGGTCT CAATGCTGTT TCAGGAGAGT AATTTATTCA GCCACCTGAA TGTGCAGCAA AATATCGGTC TGGGGCTAAA CCCCGGGTTA ACGCTCAACG CCAGCCAGCG GGAAAAACGG GACGCTATCG CACGTCAGAT GGGCATTGAG AGTCTGATAG CGCGTTTGCC GGGCGAACTG TCCGGCGGCC AGCGTCAGCG GGTAGCGCTG GCGCGCTGCC TGGTACGCGA ACAGCCGGTA CTGCTGCTGG ATGAACCGTT CTCCGCGCTC GATCCCGCGC TGCGCCAGGA GATGCTGACG TTGGTCAGCG ATATCTGCCG CGAGCGACAG CTCACGCTGT TGATGGTCTC GCACAGCGTG GAAGATGCGG CGCGAATTGC GCCCCGGTCA ATCGTCGTCG CCGACGGACG CATTGCGTGG CAAGGCAAAA CAGACGAGCT ACTAAGCGGT CAGGCCAGCG CCTCAGCGCT ATTGGGCATC AAATCCCATA TTTTGTAG
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Protein sequence | MLKLIDITWL YHHLPMRFTL AVERGEQVAI LGPSGAGKST LLNLIAGFLA PASGTLLIAG EDHTLTPPSR RPVSMLFQES NLFSHLNVQQ NIGLGLNPGL TLNASQREKR DAIARQMGIE SLIARLPGEL SGGQRQRVAL ARCLVREQPV LLLDEPFSAL DPALRQEMLT LVSDICRERQ LTLLMVSHSV EDAARIAPRS IVVADGRIAW QGKTDELLSG QASASALLGI KSHIL
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