Gene SNSL254_A0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0083 
SymbolfixC 
ID6483693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp90273 
End bp91559 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content56% 
IMG OID642735526 
Productputative oxidoreductase FixC 
Protein accessionYP_002039308 
Protein GI194444813 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG ATATCTTTGA TGCCATCATC GTGGGTGCAG GTCTGGCCGG TTCGGTTGCG 
GCGCTGGTGC TTGCTCGCGA AGGTGCACAG GTGCTGGTTA TCGAGCGCGG CAATTCTGCT
GGCGCGAAGA ATGTCACCGG TGGGCGTTTG TATGCACATA GCCTGGAACG CATCATTCCC
GGCTTTGCGG ATCAGGCCCC CATTGAACGC ATGATCACCC ACGAAAAACT CGCCTTTATG
ACCGACAACG GGGCGATGAC GATGGATTAT TGCAACGGCG AGGACGCCGC ATCGTCGCAA
GTTTCTTATT CCGTTTTGCG CAGTAAATTT GACGCCTGGC TGATGGAGCA GGCCGAAGAG
GCGGGGGCGC AACTGATCAC CGGTATTCGC GTGGATAACG TTGTTCAGCG TGATGGCAAA
GTCGTGGGCG TGGAAGCCGA TGGCGATATT CTGGAAGCCA AAGTCGTAAT CCTCGCTGAC
GGGGTGAATT CTCTGCTGGC TGAAAAGCTG GGCATGGCCA AGCGTGTTGA GGCATCGCAT
GTTGCCGTCG GTGTGAAGGA ACTGATCGAA TTGCCGAAGT CGGTCATTGA AGATCGTTTC
CAGCTACAGG GCAACGAAGG TGCCGCCTGT CTGTTTGCCG GGGCGCCAAC CGATGGTCTG
ATGGGCGGTG GCTTCCTGTA TACGAATGAA ACAACCCTTT CCCTGGGGCT GGTCTGCGGA
CTTCATCATC TGAAAGACGC GAAAAAATCG GTCCCGCAAA TGCTGGAGGA TTTCAAACAG
CATCCGGCAG TTGCGCCGCT GATCGCCGGT GGCAAGCTGG TGGAATATGC CGCGCACGTT
GTACCCGAGG CGGGAATGAA TATGCAGCCT GAACTGGTGG GCGATGGCGT ACTGATTGCC
GGAGACGCTG CCGGCATGTG TATGAACCTC GGCTTTACCA TCCGGGGTAT GGATCTCGCC
ATATCCGCAG GCGAAGCGGC GGCGAAGACG GTGCTTTCGG CGATGAAGCG CGACGATTTT
AGCAAGCAGT CGCTGGGTGA ATACCGTCAG CATCTGGACG AAGGTCCGAT GCGCGATATG
CGCATGTATC AGAAACTGCC AGCTTTTCTT GATAATCCCC GCATGTTTAC CGCTTATCCC
GAAATGGCGG TCAATATCGC GCGCGACCTG TTCACCGTGG ATGGCTCCGC GCCGGTGCCG
ATGCGTAAAA AAATCCTGCG CCATGCGAAG AAAGTGGGCT TCATCAACCT GATGAAAGAT
GGCCTGAAAG GAGTGACCGT ATTATGA
 
Protein sequence
MSEDIFDAII VGAGLAGSVA ALVLAREGAQ VLVIERGNSA GAKNVTGGRL YAHSLERIIP 
GFADQAPIER MITHEKLAFM TDNGAMTMDY CNGEDAASSQ VSYSVLRSKF DAWLMEQAEE
AGAQLITGIR VDNVVQRDGK VVGVEADGDI LEAKVVILAD GVNSLLAEKL GMAKRVEASH
VAVGVKELIE LPKSVIEDRF QLQGNEGAAC LFAGAPTDGL MGGGFLYTNE TTLSLGLVCG
LHHLKDAKKS VPQMLEDFKQ HPAVAPLIAG GKLVEYAAHV VPEAGMNMQP ELVGDGVLIA
GDAAGMCMNL GFTIRGMDLA ISAGEAAAKT VLSAMKRDDF SKQSLGEYRQ HLDEGPMRDM
RMYQKLPAFL DNPRMFTAYP EMAVNIARDL FTVDGSAPVP MRKKILRHAK KVGFINLMKD
GLKGVTVL