Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0006 |
Symbol | |
ID | 6483544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 5966 |
End bp | 7396 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642735451 |
Product | amino-acid carrier protein AlsT |
Protein accession | YP_002039233 |
Protein GI | 194442782 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.557087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGT TTTTCAGTTT TATTAACGAA ATACTCTGGG GCTCGGTAAT GATTTACCTG CTGCTCGGCG CAGGATGTTG GTTTACCTGG CGTACCGGAT TCATTCAATT TCGTTATATT CGCCAATTTA GCCGCAGTCT GAAAGGCAGC CTTAGCCCGC AGCCAGGCGG CCTGACGTCA TTTCAGGCGC TGTGTACCAG CCTCGCGGCG CGGATTGGCA GCGGTAATCT GGCCGGCGTG GCGCTGGCTA TCGCCGCAGG CGGTCCCGGC GCGGTATTCT GGATGTGGGT CTCGGCCATC ATTGGCATGG CGACCTCCTT CGCCGAGTGT TCGCTTGCCC AGCTTTATAA AGAACGTGAC CCGACAGGCC AGTTCCGCGG CGGCCCGGCG TGGTATATGG CGCGTGGGCT GGGAATGCGC TGGATGGGCG TGGTTTTCGC CCTCTTTCTG CTCGTCGCCT ACGGGTTGAT TTTTAATAGC GTGCAGGCGA ATGCCGTCTC ACGCGCGCTC CATTTCGCCT TCAACATTCC GCCGCTTATC TCCGGCATTG CTCTGGCGTT CTGTGCCCTG TTAATTATCA TTCGCGGCAT AAAAGGCGTC GCCCGCCTGA TGCAATGGCT GATTCCCCTC ATCGCGTTAT TGTGGGTCGC CGGCAGCGTG TTCATTTGCC TCTGGCATAT TGAGCAAATG CCTGGCGTTA TCGCCTCGAT AGTCAAAAGC GCATTTGGCT GGCAGGAAGC CGCGGCAGGC GCAGCCGGAT ATACGCTCAC TCAGGCTATT ACCAGCGGTT TTCAGCGTGG GATGTTCTCT AATGAAGCGG GAATGGGGTC AACGCCTAAT GCGGCCGCAG CGGCAACGTC GTATCCCCCT CACCCTGTCG CGCAGGGGAT TGTGCAAATG ATTGGCGTAT TCAGCGACAC CATTATCATC TGTACCGCCA GCGCGATGAT TATCCTGCTG GCGGGGAATC ACGCGTCCCA CTCGTCAACA GAAGGCATTC AGCTTCTCCA ACATGCAATG GTTTCGTTGA CCGGTGAATG GGGCGCCAGT TTTGTCGCGC TTATCGTCAT TCTGTTCGCG TTCAGTTCTA TCGTCGCCAA CTATATTTAC GCCGAAAACA ATCTGTTTTT TCTGCGGTTA CATAACGCAA AGGCCATCTG GCTATTACGC CTTGCGACGC TTGGCATGGT TATCGCCGGT ACGCTTATCA GTTTTCCGCT GATATGGCAG CTCGCTGACA TGATCATGGC CTGTATGGCC ATTACCAATC TGACAGCGAT TTTGTTGCTC TCACCGGTGG TGTATACCCT CGCCGGCGAT TATCTGCGAC AACGGAAACT GGGCGTAAGA CCGCAGTTTG ATCCGCGGCG CTTCCCGGAT ATCGAACCAC AACTGGCGCC AGATACCTGG GAGGCGGCAT CGCGCGATTA A
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Protein sequence | MPEFFSFINE ILWGSVMIYL LLGAGCWFTW RTGFIQFRYI RQFSRSLKGS LSPQPGGLTS FQALCTSLAA RIGSGNLAGV ALAIAAGGPG AVFWMWVSAI IGMATSFAEC SLAQLYKERD PTGQFRGGPA WYMARGLGMR WMGVVFALFL LVAYGLIFNS VQANAVSRAL HFAFNIPPLI SGIALAFCAL LIIIRGIKGV ARLMQWLIPL IALLWVAGSV FICLWHIEQM PGVIASIVKS AFGWQEAAAG AAGYTLTQAI TSGFQRGMFS NEAGMGSTPN AAAAATSYPP HPVAQGIVQM IGVFSDTIII CTASAMIILL AGNHASHSST EGIQLLQHAM VSLTGEWGAS FVALIVILFA FSSIVANYIY AENNLFFLRL HNAKAIWLLR LATLGMVIAG TLISFPLIWQ LADMIMACMA ITNLTAILLL SPVVYTLAGD YLRQRKLGVR PQFDPRRFPD IEPQLAPDTW EAASRD
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