| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2534 |
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| Symbol | yycF |
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| ID | 3240735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2591085 |
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| End bp | 2591786 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637169206 |
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| Product | DNA-binding response regulator YycF |
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| Protein accession | YP_190075 |
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| Protein GI | 57865896 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAGAA AAGTTGTTGT AGTTGACGAT GAAAAACCAA TTGCTGATAT TTTAGAATTT
AATTTAAAAA AAGAAGGTTA CGACGTATAT TGCGCTTATG ACGGTAATGA CGCAGTAGAT
TTAATCTATG AAGAAGAACC AGATATCGTC TTACTTGATA TCATGTTACC TGGTAGAGAT
GGTATGGAAG TATGTCGTGA AGTGCGTAAA AAGTATGAAA TGCCGATTAT CATGCTGACA
GCGAAAGATT CTGAAATTGA TAAAGTATTA GGCCTTGAAT TAGGTGCAGA TGATTACGTA
ACTAAACCAT TTAGTACTCG TGAACTCATC GCACGTGTGA AAGCGAACTT ACGCCGTCAT
TATTCACAAC CAGCTCAAGA AGTAAGTGGT GCGACAAATG AAATTACAAT TAAAGATATT
GTGATTTATC CAGATGCATA TTCAATTAAA AAACGTGGAG AAGACATTGA ATTAACGCAT
CGTGAATTCG AGCTATTCCA TTATCTTTCT AAACATATGG GTCAAGTCAT GACACGTGAA
CACTTACTAC AAACAGTGTG GGGTTACGAT TATTTTGGTG ATGTTCGTAC TGTGGACGTA
ACAATTCGCC GTTTAAGAGA AAAAATTGAA GATGATCCAT CTCATCCAGA ATACATTGTG
ACACGTAGAG GCGTTGGATA CTTCCTCCAA CAACATGATT AG
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| Protein sequence | MARKVVVVDD EKPIADILEF NLKKEGYDVY CAYDGNDAVD LIYEEEPDIV LLDIMLPGRD
GMEVCREVRK KYEMPIIMLT AKDSEIDKVL GLELGADDYV TKPFSTRELI ARVKANLRRH
YSQPAQEVSG ATNEITIKDI VIYPDAYSIK KRGEDIELTH REFELFHYLS KHMGQVMTRE
HLLQTVWGYD YFGDVRTVDV TIRRLREKIE DDPSHPEYIV TRRGVGYFLQ QHD
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