| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2375 |
|---|
| Symbol | |
|---|
| ID | 3242472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2423457 |
|---|
| End bp | 2424296 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637169054 |
|---|
| Product | diaminopimelate epimerase family protein |
|---|
| Protein accession | YP_189923 |
|---|
| Protein GI | 57865749 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0350844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGTC AAGTGGTCGA ATTTTCAAAA TATAATCCAT CTGGGAATAT GACAATTCTT
GTTCATTCAA AGCATCAACC GAGCGAATAT GCTGCGATTG CACATCAGTT GATGGCGACA
ACACACATGT GTTGTGAACA AGTAGGGTTT ATTGAATCAG TAAACTATGA AAATGGGGAT
AACTATCACT TGGTAATGAG TGGAAATGAA TTTTGTGGTA ATGCGACTAT GTCTTACATT
CACTATTTAA AAGAACGTTT ATTGATACAG CATCAACAAT TTCAATTAAG AGTTTCGGGG
TGTTCTCATC CTGTAGAGTG TAAAGTTCAT TCGCAACATT ATGAAGTGAC TATGCCAAAA
GTACATCAAG TTAAGGAAAG ATTTGTGAAA TTAGGGGAAC AGCAGTTTAA AGCATTTGAA
ATTAGCTATG ATACATACAT TCACTATGTG ATGATGTGTG ATGATGTAGA TTTGGCAATA
AAACAGTGCG TGGAAGATTT TGTCAGTGCG CAAACATGGC ATCGACAATT TAAAACAATT
GGTGTCATGC TTTTTCAACA AGATAAACAA TTCATATATC CACTGATACA TATACCTGCA
ATAGATAGCT TAATCTGGGA AAATAGCTGT GGTTCAGGAG CGGCTTCTAT CGGTGTGTTG
GTTAATTATC TAACAGATCA TGATATTCAA GATTACCTAG TTAACCAACC CGGAGGCAGT
ATTATTGTCT CATCCAGAAA GTCTGGACAA AATGAATATC AAACAACGAT TAAGGGTCAA
GTTTCAACTG TTGCAACAGG ACAAGCATAT ATAGAACAGG AGACAATGAC GCAAATATGA
|
|---|
| Protein sequence | MQRQVVEFSK YNPSGNMTIL VHSKHQPSEY AAIAHQLMAT THMCCEQVGF IESVNYENGD
NYHLVMSGNE FCGNATMSYI HYLKERLLIQ HQQFQLRVSG CSHPVECKVH SQHYEVTMPK
VHQVKERFVK LGEQQFKAFE ISYDTYIHYV MMCDDVDLAI KQCVEDFVSA QTWHRQFKTI
GVMLFQQDKQ FIYPLIHIPA IDSLIWENSC GSGAASIGVL VNYLTDHDIQ DYLVNQPGGS
IIVSSRKSGQ NEYQTTIKGQ VSTVATGQAY IEQETMTQI
|
|---|
| |