| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2320 |
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| Symbol | |
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| ID | 3242997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 2357317 |
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| End bp | 2358909 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637169000 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_189869 |
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| Protein GI | 57865784 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.439021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA AACGAAAAAT AAACAATACG CTTGTTTATA CTATCTCTGT TTTAATTATT
GTTGTTATTA CTCTTATTGC GGGTATCTTT CCTAAAGCAT TTGGGATGTA TGCGCAGAGC
GTTTATGATT GGATTACAAA TTGGTTTGGT TGGCTATTCC TTATCATTGT CTTTATTTTA
GATGTATTTT TAATATTCTT AGCTTTTTCT AGATATGGTC GATTTAAACT TGGTTCGGAT
GAAGAAGAAC CAGAATTTTC CATGCTATCT TGGATTGGCA TGTTATTTTC AGCAGGTCTT
GGCGTCGGTA TAGTCTTTTG GGGTGTTGCA GAACCTTTAA CGCATTATCT CCATTCACCC
TTCCCTGGAA AAATTGCAGA TCACTCTGAA GAATCAGCAC GTGTTGCGAT GGGATATACA
TTCTTCCATT GGGGTATTTC ACAATGGTCA ATATTTGCAA TTTCAGGATT AATCGTTGCA
TACTTTCAAT TTAGAAAACA ACGTAACGGG CTTATTTCAA CAGCTATGGA ACCCGTTTTT
GGTGAAGCTT ATAAACGTCC TTTCAGGAAT ATTATTGATA TATTAGCTAT TATCGCAACC
GTCATGGGAA TTGCTACGTC GATTGGTTTG GGAATTATGC AAATCGGTGG TGGATTAAAC
CATCTCTTTG ATGTTCCTAA TAATAATTTC ACTAAAATCT TAATTACTAT TTTGATGGTA
GCCATATTTT TAGGATCTTC ATTAACTGGC TTAAATCACG GTGTAAAATG GTTAAGTAAT
TTAAATATTT TATTAGGTGC TATTTTACTT ATATTTATTT TGATTTTTGG AGATTTAAAA
TTTATTTTAG AATCATACAC ACTAGCAATT TCTGATTATT TGCAGCATTT TATAGAATAT
AGTTTACGCG TAAATCCATA CTCAGGAGAT GATAGTTGGA TTCAACAGTG GACTGTTTTC
TATTGGGCTT GGGTTATTTC TTGGTCCCCT TTTATTGGGG GCTTTGTAGC AAGAGTATCT
CGAGGACGTA CAATTAGAGA ATTTGTCGTA GGTGTACTCA TTATTCCTCC TCTAATTTCG
TTTACATGGA TTGCAGGTTT TGGAGGTACA GCTATTAAAC TTGCTTTAAA TCATAACGAC
AAGCTTGTTC ATATTGTAGA TAAAGATTAT ACTGTTGCCT TGTTTGAATT ATTATCACAT
TTTCCATTGT CGGAAGTCAC TAGTTCCTTA GCTATTGTAC TTATTTTCAT CTTTATTGTA
ACAAGTGCTG ATTCAACTAC GCATATTGTT GCAGGTATGG CTACAGGTGG TTCTATCAAT
CCAACTTTAA AACATAAAGT CCTATGGGGT CTACTTATTG GGGCGATTTC AGTTGCTATG
ACAATTGCAG GTGGTCTTAA AAGTTTACAA ACTGCATCAG TTATTACAGG TCTACCATTC
TCTATCATTT TATTATTAAT GATATTCTCA CTCATGAGGG CTTTAAAAAG AGAACCCATC
CATCATTTTA AAATGACATC AATTGATGAT GAAAAAGATT ACTCTATTTC ATTAGAAGAG
CGTGAAAAAC AGGACGAACA AGATAACAAG TAA
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| Protein sequence | MKNKRKINNT LVYTISVLII VVITLIAGIF PKAFGMYAQS VYDWITNWFG WLFLIIVFIL
DVFLIFLAFS RYGRFKLGSD EEEPEFSMLS WIGMLFSAGL GVGIVFWGVA EPLTHYLHSP
FPGKIADHSE ESARVAMGYT FFHWGISQWS IFAISGLIVA YFQFRKQRNG LISTAMEPVF
GEAYKRPFRN IIDILAIIAT VMGIATSIGL GIMQIGGGLN HLFDVPNNNF TKILITILMV
AIFLGSSLTG LNHGVKWLSN LNILLGAILL IFILIFGDLK FILESYTLAI SDYLQHFIEY
SLRVNPYSGD DSWIQQWTVF YWAWVISWSP FIGGFVARVS RGRTIREFVV GVLIIPPLIS
FTWIAGFGGT AIKLALNHND KLVHIVDKDY TVALFELLSH FPLSEVTSSL AIVLIFIFIV
TSADSTTHIV AGMATGGSIN PTLKHKVLWG LLIGAISVAM TIAGGLKSLQ TASVITGLPF
SIILLLMIFS LMRALKREPI HHFKMTSIDD EKDYSISLEE REKQDEQDNK
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