| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2252 |
|---|
| Symbol | sepA |
|---|
| ID | 3242684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2280162 |
|---|
| End bp | 2281685 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637168933 |
|---|
| Product | extracellular elastase precursor |
|---|
| Protein accession | YP_189803 |
|---|
| Protein GI | 57865650 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3227] Zinc metalloprotease (elastase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATT TTTCTAAATT CGCACTTACA AGTATTGCCG CATTAACTGT GGCAAGTCCT
TTAGTCAATA CGGAGGTTGA CGCTAAGGAT AAAGTATCAG CAACTCAAAA CATCGATGCG
AAAGTAACCC AAGAATCTCA AGCAACTAAC GCATTGAAAG AGTTACCAAA ATCTGAAAAT
ATAAAAAAGC ATTACAAAGA TTATAAGGTC ACTGATACTG AAAAAGATAA CAAAGGATTT
ACGCATTACA CATTGCAACC GAAAGTGGGC AACACGTATG CACCAGACAA AGAAGTAAAA
GTTCATACGA ATAAAGAGGG TAAGGTAGTT CTTGTCAATG GTGATACTGA TGCTAAGAAA
GTTCAACCTA CGAATAAGGT AGCGATAAGT AAAGAAAGTG CCACAGATAA AGCTTTCGAA
GCAATAAAAA TTGACCGTCA AAAAGCTAAA AACTTAAAAA GTGATGTCAT CAAAACCAAT
AAAGTTGAGA TTGATGGAGA AAAAAATAAA TATGTTTATA ACATAGAAAT TATTACAACT
TCACCAAAAA TCTCTCATTG GAATGTGAAA ATTGACGCTG AAACTGGTCA AGTGGTTGAT
AAATTAAATA TGATCAAAGA AGCAGCTACT ACAGGTACAG GTAAAGGTGT ACTAGGTGAC
ACGAAACAAA TTAATATTAA TAGTGTCAGC GGTGGTTATA CACTACAAGA TTTAACTCAA
CAAGGTACAC TTTCAGCTTA CAATTACGAT GCGAATACTG GTCAAGCTTA CTTAATGCAA
GATAAAGATA AAAATTTTGT TGATGATGAA CAACGTGCAG GTGTAGATGC AAATTATTAT
GCTAAAGAAA CGTATGACTA TTATAAAAAT ACTTTCGGCC GAGAATCATA TGATAATCAA
GGTAGCCCAA TTATTTCAAT CGCACATGTA AATAACTTCC AAGGTCAAGA TAACAGAAAC
AATGCAGCTT GGATTGGTGA TAAAATGATT TACGGTGACG GTGATGGACG TACATTTACA
GCGTTGTCTG GTGCGAATGA TGTTGTTGCA CATGAAATTA CACATGGTGT AACACAGCAA
ACTGCTAATC TTGTTTACCG TTCTCAATCA GGTGCATTAA ATGAAAGTTT TTCAGATGTA
TTTGGTTACT TCATTGATGA TGAAGATTTC TTAATGGGTG AAGATGTTTA CACACCTGGT
GTAGGCGGAG ATGCCTTAAG AAGTATGTCT AATCCAGAGC GTTTTGGACA ACCATCTCAT
ATGAATGATT TTGTTTATAC AAATTCTGAC AACGGAGGCG TACATACGAA TTCAGGTATT
CCGAACAAAG CAGCTTACAA CACAATTCGT AGTATTGGTA AACAACGTTC TGAACAAATT
TATTATAGAG CGTTAACTGT TTATTTAACT TCAAATTCTG ATTTCCAAGA TGCCAAAGCA
TCATTACAAC AAGCAGCATT TGATTTATAT GGCGACGGTA TTGCTCAACA AGTAGGTCAA
GCATGGGACA GTGTTGGCGT GTAG
|
|---|
| Protein sequence | MKNFSKFALT SIAALTVASP LVNTEVDAKD KVSATQNIDA KVTQESQATN ALKELPKSEN
IKKHYKDYKV TDTEKDNKGF THYTLQPKVG NTYAPDKEVK VHTNKEGKVV LVNGDTDAKK
VQPTNKVAIS KESATDKAFE AIKIDRQKAK NLKSDVIKTN KVEIDGEKNK YVYNIEIITT
SPKISHWNVK IDAETGQVVD KLNMIKEAAT TGTGKGVLGD TKQININSVS GGYTLQDLTQ
QGTLSAYNYD ANTGQAYLMQ DKDKNFVDDE QRAGVDANYY AKETYDYYKN TFGRESYDNQ
GSPIISIAHV NNFQGQDNRN NAAWIGDKMI YGDGDGRTFT ALSGANDVVA HEITHGVTQQ
TANLVYRSQS GALNESFSDV FGYFIDDEDF LMGEDVYTPG VGGDALRSMS NPERFGQPSH
MNDFVYTNSD NGGVHTNSGI PNKAAYNTIR SIGKQRSEQI YYRALTVYLT SNSDFQDAKA
SLQQAAFDLY GDGIAQQVGQ AWDSVGV
|
|---|
| |